Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.65■□□□□ 0.74
CLCN4P51793 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN4P51793 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN4P51793 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN4P51793 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN4P51793 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN4P51793 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCN4P51793 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN4P51793 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CLCN4P51793 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CLCN4P51793 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLCN4P51793 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLCN4P51793 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.64■□□□□ 0.74
CLCN4P51793 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCN4P51793 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.64■□□□□ 0.73
CLCN4P51793 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CLCN4P51793 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CLCN4P51793 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCN4P51793 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.64■□□□□ 0.73
CLCN4P51793 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCN4P51793 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLCN4P51793 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN4P51793 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCN4P51793 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN4P51793 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN4P51793 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CLCN4P51793 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
CLCN4P51793 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLCN4P51793 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CLCN4P51793 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLCN4P51793 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN4P51793 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN4P51793 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 FEM1AP3-201ENST00000403722 1741 ntBASIC19.63■□□□□ 0.73
CLCN4P51793 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 AC034236.2-201ENST00000606662 1610 ntBASIC19.63■□□□□ 0.73
CLCN4P51793 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN4P51793 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.63■□□□□ 0.73
CLCN4P51793 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CLCN4P51793 AC079781.3-201ENST00000449110 356 ntBASIC19.63■□□□□ 0.73
CLCN4P51793 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 AL160237.2-201ENST00000556165 472 ntBASIC19.63■□□□□ 0.73
CLCN4P51793 MIR3180-4-201ENST00000582223 153 ntBASIC19.63■□□□□ 0.73
CLCN4P51793 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.63■□□□□ 0.73
CLCN4P51793 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.63■□□□□ 0.73
CLCN4P51793 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN4P51793 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLCN4P51793 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN4P51793 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLCN4P51793 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN4P51793 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN4P51793 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLCN4P51793 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CLCN4P51793 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN4P51793 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN4P51793 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN4P51793 AC104819.1-201ENST00000504587 486 ntBASIC19.62■□□□□ 0.73
CLCN4P51793 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN4P51793 LINC01711-201ENST00000598340 967 ntBASIC19.62■□□□□ 0.73
CLCN4P51793 IGHV3-41-201ENST00000613121 348 ntBASIC19.62■□□□□ 0.73
CLCN4P51793 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CLCN4P51793 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN4P51793 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN4P51793 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN4P51793 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN4P51793 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CLCN4P51793 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN4P51793 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CLCN4P51793 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN4P51793 AC006333.2-201ENST00000607957 2099 ntBASIC19.61■□□□□ 0.73
CLCN4P51793 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN4P51793 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN4P51793 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN4P51793 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCN4P51793 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN4P51793 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCN4P51793 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCN4P51793 GPR32P1-201ENST00000601788 811 ntBASIC19.61■□□□□ 0.73
CLCN4P51793 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCN4P51793 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN4P51793 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms