Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.6■□□□□ 0.25
ASCL1P50553 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.6■□□□□ 0.25
ASCL1P50553 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.6■□□□□ 0.25
ASCL1P50553 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.6■□□□□ 0.25
ASCL1P50553 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.6■□□□□ 0.25
ASCL1P50553 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.6■□□□□ 0.25
ASCL1P50553 SDHAP1-207ENST00000440850 2000 ntBASIC16.6■□□□□ 0.25
ASCL1P50553 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ASCL1P50553 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
ASCL1P50553 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.59■□□□□ 0.25
ASCL1P50553 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 GPAT2P1-201ENST00000444924 1672 ntBASIC16.59■□□□□ 0.25
ASCL1P50553 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ASCL1P50553 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.59■□□□□ 0.25
ASCL1P50553 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.59■□□□□ 0.25
ASCL1P50553 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ASCL1P50553 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.59■□□□□ 0.25
ASCL1P50553 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ASCL1P50553 MCCD1P1-208ENST00000445732 328 ntBASIC16.59■□□□□ 0.25
ASCL1P50553 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.59■□□□□ 0.25
ASCL1P50553 RASA4DP-201ENST00000460726 1199 ntBASIC16.59■□□□□ 0.25
ASCL1P50553 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.59■□□□□ 0.25
ASCL1P50553 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.59■□□□□ 0.25
ASCL1P50553 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.59■□□□□ 0.25
ASCL1P50553 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.59■□□□□ 0.25
ASCL1P50553 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
ASCL1P50553 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.59■□□□□ 0.25
ASCL1P50553 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.59■□□□□ 0.25
ASCL1P50553 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.59■□□□□ 0.25
ASCL1P50553 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.59■□□□□ 0.25
ASCL1P50553 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ASCL1P50553 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ASCL1P50553 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ASCL1P50553 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.58■□□□□ 0.25
ASCL1P50553 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ASCL1P50553 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ASCL1P50553 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
ASCL1P50553 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ASCL1P50553 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 HBZP1-201ENST00000354915 429 ntBASIC16.58■□□□□ 0.24
ASCL1P50553 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.58■□□□□ 0.24
ASCL1P50553 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.58■□□□□ 0.24
ASCL1P50553 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.58■□□□□ 0.24
ASCL1P50553 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.58■□□□□ 0.24
ASCL1P50553 MIR3180-5-201ENST00000583743 153 ntBASIC16.58■□□□□ 0.24
ASCL1P50553 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.58■□□□□ 0.24
ASCL1P50553 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.58■□□□□ 0.24
ASCL1P50553 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 AC036111.1-201ENST00000533973 1582 ntBASIC16.58■□□□□ 0.24
ASCL1P50553 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.58■□□□□ 0.24
ASCL1P50553 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ASCL1P50553 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ASCL1P50553 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ASCL1P50553 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ASCL1P50553 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ASCL1P50553 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ASCL1P50553 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ASCL1P50553 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ASCL1P50553 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.57■□□□□ 0.24
ASCL1P50553 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ASCL1P50553 AC125437.2-201ENST00000625180 2167 ntBASIC16.57■□□□□ 0.24
ASCL1P50553 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ASCL1P50553 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms