Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.64■□□□□ 0.25
CSNK1A1P48729 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.64■□□□□ 0.25
CSNK1A1P48729 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 AL596275.1-201ENST00000423464 877 ntBASIC16.64■□□□□ 0.25
CSNK1A1P48729 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.64■□□□□ 0.25
CSNK1A1P48729 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.64■□□□□ 0.25
CSNK1A1P48729 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 C2orf69P3-201ENST00000565542 1120 ntBASIC16.64■□□□□ 0.25
CSNK1A1P48729 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1A1P48729 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CSNK1A1P48729 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSNK1A1P48729 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 AL138781.2-201ENST00000617896 1843 ntBASIC16.63■□□□□ 0.25
CSNK1A1P48729 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.63■□□□□ 0.25
CSNK1A1P48729 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 SLC25A1P2-201ENST00000430693 912 ntBASIC16.63■□□□□ 0.25
CSNK1A1P48729 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 AC008622.2-201ENST00000617006 1229 ntBASIC16.63■□□□□ 0.25
CSNK1A1P48729 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.63■□□□□ 0.25
CSNK1A1P48729 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSNK1A1P48729 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 MTMR9LP-203ENST00000426597 1545 ntBASIC16.62■□□□□ 0.25
CSNK1A1P48729 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 MCCD1P1-208ENST00000445732 328 ntBASIC16.62■□□□□ 0.25
CSNK1A1P48729 CCR12P-201ENST00000446203 998 ntBASIC16.62■□□□□ 0.25
CSNK1A1P48729 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.62■□□□□ 0.25
CSNK1A1P48729 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.62■□□□□ 0.25
CSNK1A1P48729 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CSNK1A1P48729 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.61■□□□□ 0.25
CSNK1A1P48729 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 AL023284.2-201ENST00000405850 579 ntBASIC16.61■□□□□ 0.25
CSNK1A1P48729 TSPY17P-201ENST00000450329 467 ntBASIC16.61■□□□□ 0.25
CSNK1A1P48729 TSPY15P-201ENST00000457163 923 ntBASIC16.61■□□□□ 0.25
CSNK1A1P48729 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 AL109659.2-201ENST00000606809 1674 ntBASIC16.61■□□□□ 0.25
CSNK1A1P48729 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CSNK1A1P48729 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CSNK1A1P48729 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.6■□□□□ 0.25
CSNK1A1P48729 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms