Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX5P45973 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX5P45973 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX5P45973 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CBX5P45973 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX5P45973 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.09■□□□□ 0.17
CBX5P45973 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.09■□□□□ 0.17
CBX5P45973 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.09■□□□□ 0.17
CBX5P45973 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX5P45973 ZNRF2P3-201ENST00000424200 374 ntBASIC16.09■□□□□ 0.17
CBX5P45973 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX5P45973 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CBX5P45973 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CBX5P45973 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX5P45973 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CBX5P45973 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX5P45973 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CBX5P45973 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
CBX5P45973 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CBX5P45973 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.08■□□□□ 0.17
CBX5P45973 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CBX5P45973 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CBX5P45973 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.08■□□□□ 0.16
CBX5P45973 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX5P45973 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.16
CBX5P45973 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CBX5P45973 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.08■□□□□ 0.16
CBX5P45973 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.08■□□□□ 0.16
CBX5P45973 AL121906.2-201ENST00000621597 723 ntBASIC16.08■□□□□ 0.16
CBX5P45973 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CBX5P45973 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX5P45973 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX5P45973 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CBX5P45973 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
CBX5P45973 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX5P45973 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CBX5P45973 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CBX5P45973 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CBX5P45973 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.07■□□□□ 0.16
CBX5P45973 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.07■□□□□ 0.16
CBX5P45973 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CBX5P45973 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CBX5P45973 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 AC093787.1-201ENST00000450396 207 ntBASIC16.07■□□□□ 0.16
CBX5P45973 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.07■□□□□ 0.16
CBX5P45973 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.07■□□□□ 0.16
CBX5P45973 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CBX5P45973 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CBX5P45973 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.07■□□□□ 0.16
CBX5P45973 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms