Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A1P43005 KRT18P41-201ENST00000518924 1277 ntBASIC19.58■□□□□ 0.72
SLC1A1P43005 ITM2C-210ENST00000620962 501 ntBASIC19.58■□□□□ 0.72
SLC1A1P43005 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC1A1P43005 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
SLC1A1P43005 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A1P43005 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A1P43005 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A1P43005 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC1A1P43005 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A1P43005 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC1A1P43005 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC1A1P43005 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC1A1P43005 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLC1A1P43005 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC1A1P43005 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC1A1P43005 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC1A1P43005 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC1A1P43005 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.57■□□□□ 0.72
SLC1A1P43005 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SLC1A1P43005 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC1A1P43005 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SLC1A1P43005 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SLC1A1P43005 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SLC1A1P43005 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 AC096733.2-201ENST00000609937 1394 ntBASIC19.57■□□□□ 0.72
SLC1A1P43005 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC1A1P43005 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SLC1A1P43005 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC1A1P43005 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SLC1A1P43005 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC1A1P43005 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC1A1P43005 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC1A1P43005 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.56■□□□□ 0.72
SLC1A1P43005 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC1A1P43005 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SLC1A1P43005 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC1A1P43005 DGCR10-201ENST00000609839 495 ntBASIC19.56■□□□□ 0.72
SLC1A1P43005 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.56■□□□□ 0.72
SLC1A1P43005 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC1A1P43005 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC1A1P43005 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC1A1P43005 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC1A1P43005 KRT18P29-201ENST00000397031 1267 ntBASIC19.55■□□□□ 0.72
SLC1A1P43005 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SLC1A1P43005 FAM197Y1-201ENST00000421178 764 ntBASIC19.55■□□□□ 0.72
SLC1A1P43005 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC1A1P43005 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC1A1P43005 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC1A1P43005 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.55■□□□□ 0.72
SLC1A1P43005 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.55■□□□□ 0.72
SLC1A1P43005 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC1A1P43005 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC1A1P43005 CD177P1-201ENST00000606252 935 ntBASIC19.55■□□□□ 0.72
SLC1A1P43005 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC1A1P43005 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.55■□□□□ 0.72
SLC1A1P43005 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SLC1A1P43005 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC1A1P43005 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SLC1A1P43005 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
SLC1A1P43005 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC1A1P43005 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SLC1A1P43005 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC1A1P43005 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SLC1A1P43005 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC1A1P43005 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC1A1P43005 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC1A1P43005 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC1A1P43005 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms