Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RPS2P28-201ENST00000314255 741 ntBASIC26.35■■□□□ 1.81
CPS1P31327 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CPS1P31327 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CPS1P31327 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CPS1P31327 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CPS1P31327 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC26.35■■□□□ 1.81
CPS1P31327 ELP6-205ENST00000439305 880 ntTSL 2 BASIC26.35■■□□□ 1.81
CPS1P31327 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CPS1P31327 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.35■■□□□ 1.81
CPS1P31327 MIR5100-201ENST00000579544 119 ntBASIC26.35■■□□□ 1.81
CPS1P31327 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CPS1P31327 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC26.35■■□□□ 1.81
CPS1P31327 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CPS1P31327 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC26.35■■□□□ 1.81
CPS1P31327 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC26.35■■□□□ 1.81
CPS1P31327 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CPS1P31327 RCC2P3-201ENST00000418112 1537 ntBASIC26.35■■□□□ 1.81
CPS1P31327 AC092667.1-201ENST00000434301 2586 ntBASIC26.35■■□□□ 1.81
CPS1P31327 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CPS1P31327 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CPS1P31327 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CPS1P31327 PMP22-202ENST00000395936 816 ntTSL 3 BASIC26.34■■□□□ 1.81
CPS1P31327 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC26.34■■□□□ 1.81
CPS1P31327 KRT18P3-201ENST00000451602 1288 ntBASIC26.34■■□□□ 1.81
CPS1P31327 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC26.34■■□□□ 1.81
CPS1P31327 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC26.34■■□□□ 1.81
CPS1P31327 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC26.34■■□□□ 1.81
CPS1P31327 LBX2-AS1-202ENST00000603175 2083 ntBASIC26.34■■□□□ 1.81
CPS1P31327 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC26.34■■□□□ 1.81
CPS1P31327 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.34■■□□□ 1.81
CPS1P31327 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CPS1P31327 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC26.34■■□□□ 1.81
CPS1P31327 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CPS1P31327 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CPS1P31327 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC26.34■■□□□ 1.81
CPS1P31327 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CPS1P31327 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
CPS1P31327 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC26.34■■□□□ 1.81
CPS1P31327 FAM8A3P-201ENST00000427218 844 ntBASIC26.34■■□□□ 1.81
CPS1P31327 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC26.34■■□□□ 1.81
CPS1P31327 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
CPS1P31327 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CPS1P31327 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC26.33■■□□□ 1.81
CPS1P31327 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC26.33■■□□□ 1.81
CPS1P31327 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC26.33■■□□□ 1.81
CPS1P31327 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.33■■□□□ 1.81
CPS1P31327 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC26.33■■□□□ 1.81
CPS1P31327 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CPS1P31327 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC26.33■■□□□ 1.81
CPS1P31327 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC26.33■■□□□ 1.81
CPS1P31327 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CPS1P31327 PPOX-214ENST00000535223 664 ntTSL 3 BASIC26.33■■□□□ 1.81
CPS1P31327 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC26.33■■□□□ 1.81
CPS1P31327 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CPS1P31327 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
CPS1P31327 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC26.32■■□□□ 1.8
CPS1P31327 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.32■■□□□ 1.8
CPS1P31327 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CPS1P31327 DDT-203ENST00000403754 569 ntTSL 3 BASIC26.32■■□□□ 1.8
CPS1P31327 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC26.32■■□□□ 1.8
CPS1P31327 HLA-J-203ENST00000494367 1087 ntBASIC26.32■■□□□ 1.8
CPS1P31327 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC26.32■■□□□ 1.8
CPS1P31327 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CPS1P31327 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC26.32■■□□□ 1.8
CPS1P31327 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CPS1P31327 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CPS1P31327 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CPS1P31327 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC26.31■■□□□ 1.8
CPS1P31327 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CPS1P31327 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 KRT18P28-201ENST00000453838 1332 ntBASIC26.31■■□□□ 1.8
CPS1P31327 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CPS1P31327 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CPS1P31327 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CPS1P31327 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms