Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PTX3P26022 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.93■□□□□ 0.46
PTX3P26022 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.93■□□□□ 0.46
PTX3P26022 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.93■□□□□ 0.46
PTX3P26022 AC090340.1-201ENST00000620778 4980 ntBASIC17.93■□□□□ 0.46
PTX3P26022 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.93■□□□□ 0.46
PTX3P26022 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PTX3P26022 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTX3P26022 AL109659.2-201ENST00000606809 1674 ntBASIC17.93■□□□□ 0.46
PTX3P26022 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PTX3P26022 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PTX3P26022 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTX3P26022 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTX3P26022 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.92■□□□□ 0.46
PTX3P26022 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.92■□□□□ 0.46
PTX3P26022 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
PTX3P26022 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PTX3P26022 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PTX3P26022 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PTX3P26022 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTX3P26022 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PTX3P26022 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.92■□□□□ 0.46
PTX3P26022 SNORA78-201ENST00000459373 127 ntBASIC17.92■□□□□ 0.46
PTX3P26022 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 AC008622.2-201ENST00000617006 1229 ntBASIC17.92■□□□□ 0.46
PTX3P26022 MYC-208ENST00000641036 567 ntBASIC17.92■□□□□ 0.46
PTX3P26022 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PTX3P26022 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTX3P26022 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.92■□□□□ 0.46
PTX3P26022 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.92■□□□□ 0.46
PTX3P26022 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.92■□□□□ 0.46
PTX3P26022 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTX3P26022 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.92■□□□□ 0.46
PTX3P26022 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.91■□□□□ 0.46
PTX3P26022 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.91■□□□□ 0.46
PTX3P26022 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTX3P26022 AL357033.4-201ENST00000617703 1807 ntBASIC17.91■□□□□ 0.46
PTX3P26022 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.91■□□□□ 0.46
PTX3P26022 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTX3P26022 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.91■□□□□ 0.46
PTX3P26022 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.91■□□□□ 0.46
PTX3P26022 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PTX3P26022 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.91■□□□□ 0.46
PTX3P26022 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.91■□□□□ 0.46
PTX3P26022 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PTX3P26022 MIR4497-201ENST00000583208 89 ntBASIC17.91■□□□□ 0.46
PTX3P26022 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.91■□□□□ 0.46
PTX3P26022 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.91■□□□□ 0.46
PTX3P26022 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
PTX3P26022 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.91■□□□□ 0.46
PTX3P26022 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTX3P26022 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTX3P26022 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PTX3P26022 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.9■□□□□ 0.46
PTX3P26022 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTX3P26022 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PTX3P26022 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.9■□□□□ 0.46
PTX3P26022 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.9■□□□□ 0.46
PTX3P26022 SLC25A1P2-201ENST00000430693 912 ntBASIC17.9■□□□□ 0.46
PTX3P26022 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.9■□□□□ 0.46
PTX3P26022 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTX3P26022 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTX3P26022 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PTX3P26022 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTX3P26022 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms