Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NFKB1P19838 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NFKB1P19838 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.01■□□□□ 0.63
NFKB1P19838 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NFKB1P19838 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.01■□□□□ 0.63
NFKB1P19838 AC066615.1-201ENST00000640911 628 ntBASIC19.01■□□□□ 0.63
NFKB1P19838 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NFKB1P19838 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NFKB1P19838 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19■□□□□ 0.63
NFKB1P19838 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19■□□□□ 0.63
NFKB1P19838 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 AL596275.1-201ENST00000423464 877 ntBASIC19■□□□□ 0.63
NFKB1P19838 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19■□□□□ 0.63
NFKB1P19838 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19■□□□□ 0.63
NFKB1P19838 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NFKB1P19838 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19■□□□□ 0.63
NFKB1P19838 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 AL023803.3-201ENST00000615559 522 ntBASIC19■□□□□ 0.63
NFKB1P19838 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NFKB1P19838 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
NFKB1P19838 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NFKB1P19838 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NFKB1P19838 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NFKB1P19838 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
NFKB1P19838 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NFKB1P19838 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NFKB1P19838 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.99■□□□□ 0.63
NFKB1P19838 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.99■□□□□ 0.63
NFKB1P19838 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.99■□□□□ 0.63
NFKB1P19838 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.99■□□□□ 0.63
NFKB1P19838 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.99■□□□□ 0.63
NFKB1P19838 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.99■□□□□ 0.63
NFKB1P19838 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NFKB1P19838 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NFKB1P19838 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NFKB1P19838 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NFKB1P19838 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
NFKB1P19838 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NFKB1P19838 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NFKB1P19838 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NFKB1P19838 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.98■□□□□ 0.63
NFKB1P19838 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.98■□□□□ 0.63
NFKB1P19838 SLC25A1P2-201ENST00000430693 912 ntBASIC18.98■□□□□ 0.63
NFKB1P19838 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.98■□□□□ 0.63
NFKB1P19838 AP003041.3-201ENST00000527151 707 ntBASIC18.98■□□□□ 0.63
NFKB1P19838 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.98■□□□□ 0.63
NFKB1P19838 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NFKB1P19838 KRT8P45-201ENST00000414328 1447 ntBASIC18.98■□□□□ 0.63
NFKB1P19838 KRT8P9-201ENST00000558927 1449 ntBASIC18.98■□□□□ 0.63
NFKB1P19838 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NFKB1P19838 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms