Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.3■□□□□ 0.36
PRKCAP17252 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.3■□□□□ 0.36
PRKCAP17252 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PRKCAP17252 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PRKCAP17252 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.3■□□□□ 0.36
PRKCAP17252 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PRKCAP17252 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRKCAP17252 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
PRKCAP17252 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.29■□□□□ 0.36
PRKCAP17252 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 KRT17P2-201ENST00000300992 1314 ntBASIC17.29■□□□□ 0.36
PRKCAP17252 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PRKCAP17252 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRKCAP17252 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.29■□□□□ 0.36
PRKCAP17252 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.29■□□□□ 0.36
PRKCAP17252 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.28■□□□□ 0.36
PRKCAP17252 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
PRKCAP17252 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.28■□□□□ 0.36
PRKCAP17252 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.28■□□□□ 0.36
PRKCAP17252 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PRKCAP17252 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.28■□□□□ 0.36
PRKCAP17252 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.28■□□□□ 0.36
PRKCAP17252 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.28■□□□□ 0.36
PRKCAP17252 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PRKCAP17252 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 TNRC18P3-201ENST00000441896 2691 ntBASIC17.28■□□□□ 0.36
PRKCAP17252 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.28■□□□□ 0.36
PRKCAP17252 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PRKCAP17252 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PRKCAP17252 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.28■□□□□ 0.36
PRKCAP17252 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRKCAP17252 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms