Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.67■□□□□ 0.42
NCK1P16333 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NCK1P16333 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
NCK1P16333 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NCK1P16333 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.67■□□□□ 0.42
NCK1P16333 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCK1P16333 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
NCK1P16333 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 CROCCP5-201ENST00000436658 830 ntBASIC17.66■□□□□ 0.42
NCK1P16333 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.66■□□□□ 0.42
NCK1P16333 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 HLA-B-256ENST00000639848 1089 ntBASIC17.66■□□□□ 0.42
NCK1P16333 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NCK1P16333 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NCK1P16333 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NCK1P16333 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCK1P16333 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.65■□□□□ 0.42
NCK1P16333 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.65■□□□□ 0.42
NCK1P16333 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NCK1P16333 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NCK1P16333 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 AC026185.1-201ENST00000445748 174 ntBASIC17.65■□□□□ 0.42
NCK1P16333 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.65■□□□□ 0.42
NCK1P16333 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.65■□□□□ 0.42
NCK1P16333 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.65■□□□□ 0.42
NCK1P16333 AC083906.2-201ENST00000511578 360 ntBASIC17.65■□□□□ 0.42
NCK1P16333 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.65■□□□□ 0.42
NCK1P16333 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NCK1P16333 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.65■□□□□ 0.42
NCK1P16333 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.65■□□□□ 0.42
NCK1P16333 HLA-A-209ENST00000638375 975 ntBASIC17.65■□□□□ 0.42
NCK1P16333 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NCK1P16333 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
NCK1P16333 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.65■□□□□ 0.42
NCK1P16333 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCK1P16333 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NCK1P16333 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.65■□□□□ 0.42
NCK1P16333 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NCK1P16333 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.64■□□□□ 0.42
NCK1P16333 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NCK1P16333 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NCK1P16333 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.64■□□□□ 0.41
NCK1P16333 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.64■□□□□ 0.41
NCK1P16333 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.64■□□□□ 0.41
NCK1P16333 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCK1P16333 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.64■□□□□ 0.41
NCK1P16333 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.64■□□□□ 0.41
NCK1P16333 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.64■□□□□ 0.41
NCK1P16333 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms