Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARAP10276 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.64■□□□□ 0.73
RARAP10276 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.64■□□□□ 0.73
RARAP10276 PCDHB18P-201ENST00000524813 2368 ntBASIC19.64■□□□□ 0.73
RARAP10276 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RARAP10276 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.63■□□□□ 0.73
RARAP10276 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.63■□□□□ 0.73
RARAP10276 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RARAP10276 HEIH-201ENST00000623091 1652 ntBASIC19.63■□□□□ 0.73
RARAP10276 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.63■□□□□ 0.73
RARAP10276 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RARAP10276 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.63■□□□□ 0.73
RARAP10276 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.63■□□□□ 0.73
RARAP10276 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RARAP10276 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.63■□□□□ 0.73
RARAP10276 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RARAP10276 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RARAP10276 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RARAP10276 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RARAP10276 AC073592.3-201ENST00000625118 1834 ntBASIC19.62■□□□□ 0.73
RARAP10276 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RARAP10276 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RARAP10276 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.62■□□□□ 0.73
RARAP10276 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.62■□□□□ 0.73
RARAP10276 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.62■□□□□ 0.73
RARAP10276 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RARAP10276 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.62■□□□□ 0.73
RARAP10276 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.62■□□□□ 0.73
RARAP10276 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.62■□□□□ 0.73
RARAP10276 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.62■□□□□ 0.73
RARAP10276 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.62■□□□□ 0.73
RARAP10276 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.62■□□□□ 0.73
RARAP10276 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.62■□□□□ 0.73
RARAP10276 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RARAP10276 AC068587.9-201ENST00000641814 219 ntBASIC19.62■□□□□ 0.73
RARAP10276 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.62■□□□□ 0.73
RARAP10276 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RARAP10276 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RARAP10276 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RARAP10276 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 KRT8P32-201ENST00000512863 1461 ntBASIC19.61■□□□□ 0.73
RARAP10276 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.61■□□□□ 0.73
RARAP10276 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.61■□□□□ 0.73
RARAP10276 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.61■□□□□ 0.73
RARAP10276 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.61■□□□□ 0.73
RARAP10276 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.61■□□□□ 0.73
RARAP10276 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.61■□□□□ 0.73
RARAP10276 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.61■□□□□ 0.73
RARAP10276 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.61■□□□□ 0.73
RARAP10276 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.61■□□□□ 0.73
RARAP10276 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.61■□□□□ 0.73
RARAP10276 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RARAP10276 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
RARAP10276 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARAP10276 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.6■□□□□ 0.73
RARAP10276 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RARAP10276 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RARAP10276 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RARAP10276 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.6■□□□□ 0.73
RARAP10276 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.6■□□□□ 0.73
RARAP10276 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.6■□□□□ 0.73
RARAP10276 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RARAP10276 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RARAP10276 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.6■□□□□ 0.73
RARAP10276 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.6■□□□□ 0.73
RARAP10276 AC008550.1-201ENST00000511500 884 ntBASIC19.6■□□□□ 0.73
RARAP10276 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.6■□□□□ 0.73
RARAP10276 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.6■□□□□ 0.73
RARAP10276 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.6■□□□□ 0.73
RARAP10276 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms