Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 BCL2-203ENST00000589955 5011 ntBASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCNYL3P0C7X3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 AL023973.1-201ENST00000624619 620 ntBASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCNYL3P0C7X3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCNYL3P0C7X3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 KRT8P45-201ENST00000414328 1447 ntBASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 AL121956.5-201ENST00000625261 221 ntBASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCNYL3P0C7X3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 AC004408.2-201ENST00000623613 2777 ntBASIC18■□□□□ 0.47
CCNYL3P0C7X3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 AL359075.1-203ENST00000462729 1002 ntBASIC18■□□□□ 0.47
CCNYL3P0C7X3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCNYL3P0C7X3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18■□□□□ 0.47
CCNYL3P0C7X3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms