Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL160286.2-201ENST00000567150 934 ntBASIC20.6■□□□□ 0.89
TPM1P09493 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.6■□□□□ 0.89
TPM1P09493 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.6■□□□□ 0.89
TPM1P09493 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.6■□□□□ 0.89
TPM1P09493 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM1P09493 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.59■□□□□ 0.89
TPM1P09493 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TPM1P09493 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
TPM1P09493 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TPM1P09493 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.59■□□□□ 0.89
TPM1P09493 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TPM1P09493 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.59■□□□□ 0.89
TPM1P09493 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.59■□□□□ 0.89
TPM1P09493 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.59■□□□□ 0.89
TPM1P09493 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.59■□□□□ 0.89
TPM1P09493 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.59■□□□□ 0.89
TPM1P09493 AL137784.2-201ENST00000607332 1000 ntBASIC20.59■□□□□ 0.89
TPM1P09493 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TPM1P09493 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.59■□□□□ 0.89
TPM1P09493 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM1P09493 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.58■□□□□ 0.89
TPM1P09493 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.58■□□□□ 0.89
TPM1P09493 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TPM1P09493 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.58■□□□□ 0.89
TPM1P09493 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TPM1P09493 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM1P09493 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TPM1P09493 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
TPM1P09493 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.58■□□□□ 0.88
TPM1P09493 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM1P09493 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TPM1P09493 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TPM1P09493 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.57■□□□□ 0.88
TPM1P09493 CROCCP5-201ENST00000436658 830 ntBASIC20.57■□□□□ 0.88
TPM1P09493 TSPY23P-201ENST00000440136 739 ntBASIC20.57■□□□□ 0.88
TPM1P09493 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM1P09493 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.57■□□□□ 0.88
TPM1P09493 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.57■□□□□ 0.88
TPM1P09493 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.57■□□□□ 0.88
TPM1P09493 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.57■□□□□ 0.88
TPM1P09493 SOX15-203ENST00000570788 1093 ntBASIC20.57■□□□□ 0.88
TPM1P09493 AC008687.6-201ENST00000596318 630 ntBASIC20.57■□□□□ 0.88
TPM1P09493 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TPM1P09493 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TPM1P09493 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.57■□□□□ 0.88
TPM1P09493 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TPM1P09493 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM1P09493 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.57■□□□□ 0.88
TPM1P09493 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
TPM1P09493 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TPM1P09493 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM1P09493 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TPM1P09493 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TPM1P09493 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM1P09493 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM1P09493 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.56■□□□□ 0.88
TPM1P09493 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM1P09493 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM1P09493 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms