Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RETP07949 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 KRT18P13-201ENST00000400056 1290 ntBASIC18.82■□□□□ 0.6
RETP07949 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RETP07949 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.82■□□□□ 0.6
RETP07949 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.82■□□□□ 0.6
RETP07949 LINC00265-3P-201ENST00000447588 903 ntBASIC18.82■□□□□ 0.6
RETP07949 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.82■□□□□ 0.6
RETP07949 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.82■□□□□ 0.6
RETP07949 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.82■□□□□ 0.6
RETP07949 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.82■□□□□ 0.6
RETP07949 TPSP2-201ENST00000561760 610 ntBASIC18.82■□□□□ 0.6
RETP07949 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.82■□□□□ 0.6
RETP07949 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.82■□□□□ 0.6
RETP07949 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.82■□□□□ 0.6
RETP07949 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RETP07949 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RETP07949 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.82■□□□□ 0.6
RETP07949 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RETP07949 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RETP07949 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.82■□□□□ 0.6
RETP07949 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RETP07949 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
RETP07949 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.81■□□□□ 0.6
RETP07949 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.81■□□□□ 0.6
RETP07949 TSPY22P-201ENST00000427496 604 ntBASIC18.81■□□□□ 0.6
RETP07949 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.81■□□□□ 0.6
RETP07949 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.81■□□□□ 0.6
RETP07949 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.81■□□□□ 0.6
RETP07949 AL671883.3-201ENST00000603274 991 ntBASIC18.81■□□□□ 0.6
RETP07949 AL121912.1-201ENST00000603683 238 ntBASIC18.81■□□□□ 0.6
RETP07949 AC120114.3-201ENST00000611923 658 ntBASIC18.81■□□□□ 0.6
RETP07949 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.81■□□□□ 0.6
RETP07949 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.81■□□□□ 0.6
RETP07949 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.81■□□□□ 0.6
RETP07949 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RETP07949 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.81■□□□□ 0.6
RETP07949 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.8■□□□□ 0.6
RETP07949 PMS2P1-201ENST00000431037 1228 ntBASIC18.8■□□□□ 0.6
RETP07949 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.8■□□□□ 0.6
RETP07949 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.8■□□□□ 0.6
RETP07949 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.8■□□□□ 0.6
RETP07949 AC024243.1-201ENST00000609234 778 ntBASIC18.8■□□□□ 0.6
RETP07949 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.8■□□□□ 0.6
RETP07949 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.8■□□□□ 0.6
RETP07949 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RETP07949 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.8■□□□□ 0.6
RETP07949 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
RETP07949 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.79■□□□□ 0.6
RETP07949 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.79■□□□□ 0.6
RETP07949 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 MRPL3P1-201ENST00000400109 1033 ntBASIC18.79■□□□□ 0.6
RETP07949 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RETP07949 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.79■□□□□ 0.6
RETP07949 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms