Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.07■□□□□ 0.32
P04436 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.07■□□□□ 0.32
P04436 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.07■□□□□ 0.32
P04436 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P04436 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.07■□□□□ 0.32
P04436 AC112907.2-201ENST00000448639 330 ntBASIC17.07■□□□□ 0.32
P04436 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.07■□□□□ 0.32
P04436 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.07■□□□□ 0.32
P04436 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.07■□□□□ 0.32
P04436 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.07■□□□□ 0.32
P04436 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.07■□□□□ 0.32
P04436 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.07■□□□□ 0.32
P04436 MYC-208ENST00000641036 567 ntBASIC17.07■□□□□ 0.32
P04436 AC068587.9-201ENST00000641814 219 ntBASIC17.07■□□□□ 0.32
P04436 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.07■□□□□ 0.32
P04436 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.07■□□□□ 0.32
P04436 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.07■□□□□ 0.32
P04436 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.07■□□□□ 0.32
P04436 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04436 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.07■□□□□ 0.32
P04436 AC034236.2-201ENST00000606662 1610 ntBASIC17.07■□□□□ 0.32
P04436 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
P04436 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
P04436 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
P04436 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.06■□□□□ 0.32
P04436 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04436 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P04436 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.06■□□□□ 0.32
P04436 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.06■□□□□ 0.32
P04436 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 AL031133.1-201ENST00000406807 723 ntBASIC17.06■□□□□ 0.32
P04436 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.06■□□□□ 0.32
P04436 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.06■□□□□ 0.32
P04436 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
P04436 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
P04436 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
P04436 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04436 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
P04436 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
P04436 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.05■□□□□ 0.32
P04436 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 SLC25A24-204ENST00000569674 2357 ntBASIC17.05■□□□□ 0.32
P04436 KRT18P38-201ENST00000449496 1282 ntBASIC17.05■□□□□ 0.32
P04436 RASA4DP-201ENST00000460726 1199 ntBASIC17.05■□□□□ 0.32
P04436 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.05■□□□□ 0.32
P04436 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.05■□□□□ 0.32
P04436 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
P04436 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.05■□□□□ 0.32
P04436 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
P04436 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04436 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 HEIH-201ENST00000623091 1652 ntBASIC17.04■□□□□ 0.32
P04436 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.04■□□□□ 0.32
P04436 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms