Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VTNP04004 AC092119.3-201ENST00000612618 583 ntBASIC20.47■□□□□ 0.87
VTNP04004 NPAP1P7-201ENST00000613027 823 ntBASIC20.47■□□□□ 0.87
VTNP04004 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.47■□□□□ 0.87
VTNP04004 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VTNP04004 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
VTNP04004 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
VTNP04004 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
VTNP04004 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.46■□□□□ 0.87
VTNP04004 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
VTNP04004 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.46■□□□□ 0.87
VTNP04004 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VTNP04004 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
VTNP04004 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.46■□□□□ 0.87
VTNP04004 MIR662-201ENST00000384847 95 ntBASIC20.46■□□□□ 0.87
VTNP04004 DUSP5P1-201ENST00000441325 1139 ntBASIC20.46■□□□□ 0.87
VTNP04004 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
VTNP04004 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.46■□□□□ 0.87
VTNP04004 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.46■□□□□ 0.87
VTNP04004 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VTNP04004 CLEC4GP1-201ENST00000596555 870 ntBASIC20.46■□□□□ 0.87
VTNP04004 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.46■□□□□ 0.87
VTNP04004 MTMR9LP-203ENST00000426597 1545 ntBASIC20.46■□□□□ 0.87
VTNP04004 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
VTNP04004 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 AC016734.2-201ENST00000624325 1377 ntBASIC20.46■□□□□ 0.87
VTNP04004 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VTNP04004 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
VTNP04004 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.45■□□□□ 0.87
VTNP04004 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
VTNP04004 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VTNP04004 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VTNP04004 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.45■□□□□ 0.86
VTNP04004 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.45■□□□□ 0.86
VTNP04004 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.45■□□□□ 0.86
VTNP04004 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
VTNP04004 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VTNP04004 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
VTNP04004 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VTNP04004 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
VTNP04004 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VTNP04004 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VTNP04004 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.44■□□□□ 0.86
VTNP04004 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.44■□□□□ 0.86
VTNP04004 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VTNP04004 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.44■□□□□ 0.86
VTNP04004 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VTNP04004 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.44■□□□□ 0.86
VTNP04004 TSSC2-201ENST00000450217 709 ntBASIC20.44■□□□□ 0.86
VTNP04004 BX276092.5-203ENST00000456199 560 ntBASIC20.44■□□□□ 0.86
VTNP04004 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VTNP04004 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VTNP04004 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.44■□□□□ 0.86
VTNP04004 KRT126P-201ENST00000549467 1181 ntBASIC20.44■□□□□ 0.86
VTNP04004 RNF126P1-202ENST00000569893 925 ntBASIC20.44■□□□□ 0.86
VTNP04004 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.44■□□□□ 0.86
VTNP04004 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.44■□□□□ 0.86
VTNP04004 AL121672.3-201ENST00000608644 468 ntBASIC20.44■□□□□ 0.86
VTNP04004 AC012313.10-201ENST00000623509 926 ntBASIC20.44■□□□□ 0.86
VTNP04004 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VTNP04004 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.44■□□□□ 0.86
VTNP04004 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
VTNP04004 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VTNP04004 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.44■□□□□ 0.86
VTNP04004 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.43■□□□□ 0.86
VTNP04004 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.43■□□□□ 0.86
VTNP04004 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
VTNP04004 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
VTNP04004 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms