Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.56■□□□□ 0.72
APOEP02649 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOEP02649 TERF1P1-201ENST00000311003 1181 ntBASIC19.56■□□□□ 0.72
APOEP02649 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOEP02649 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
APOEP02649 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.56■□□□□ 0.72
APOEP02649 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.56■□□□□ 0.72
APOEP02649 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.56■□□□□ 0.72
APOEP02649 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.56■□□□□ 0.72
APOEP02649 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOEP02649 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.56■□□□□ 0.72
APOEP02649 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOEP02649 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
APOEP02649 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
APOEP02649 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
APOEP02649 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APOEP02649 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
APOEP02649 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APOEP02649 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.55■□□□□ 0.72
APOEP02649 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.55■□□□□ 0.72
APOEP02649 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.55■□□□□ 0.72
APOEP02649 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
APOEP02649 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.55■□□□□ 0.72
APOEP02649 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
APOEP02649 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
APOEP02649 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
APOEP02649 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.55■□□□□ 0.72
APOEP02649 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.55■□□□□ 0.72
APOEP02649 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.55■□□□□ 0.72
APOEP02649 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.55■□□□□ 0.72
APOEP02649 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APOEP02649 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.54■□□□□ 0.72
APOEP02649 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.54■□□□□ 0.72
APOEP02649 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.54■□□□□ 0.72
APOEP02649 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
APOEP02649 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.54■□□□□ 0.72
APOEP02649 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.54■□□□□ 0.72
APOEP02649 MCCD1P1-208ENST00000445732 328 ntBASIC19.54■□□□□ 0.72
APOEP02649 KRT18P21-201ENST00000515767 1272 ntBASIC19.54■□□□□ 0.72
APOEP02649 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 AC010203.1-204ENST00000548782 407 ntBASIC19.54■□□□□ 0.72
APOEP02649 MIR4674-201ENST00000582457 87 ntBASIC19.54■□□□□ 0.72
APOEP02649 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
APOEP02649 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
APOEP02649 GPAT2P1-201ENST00000444924 1672 ntBASIC19.54■□□□□ 0.72
APOEP02649 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 AC006333.2-201ENST00000607957 2099 ntBASIC19.54■□□□□ 0.72
APOEP02649 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.54■□□□□ 0.72
APOEP02649 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.54■□□□□ 0.72
APOEP02649 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.54■□□□□ 0.72
APOEP02649 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APOEP02649 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
APOEP02649 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 AL512353.2-201ENST00000448759 1962 ntBASIC19.53■□□□□ 0.72
APOEP02649 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
APOEP02649 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
APOEP02649 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.53■□□□□ 0.72
APOEP02649 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
APOEP02649 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 AL023284.2-201ENST00000405850 579 ntBASIC19.53■□□□□ 0.72
APOEP02649 KRT18P57-201ENST00000443599 1254 ntBASIC19.53■□□□□ 0.72
APOEP02649 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 AC092865.7-201ENST00000641832 219 ntBASIC19.53■□□□□ 0.72
APOEP02649 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
APOEP02649 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
APOEP02649 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
APOEP02649 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOEP02649 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
APOEP02649 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms