Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 KRT18P23-201ENST00000435622 1283 ntBASIC20.64■□□□□ 0.89
CD4P01730 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.64■□□□□ 0.89
CD4P01730 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
CD4P01730 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.64■□□□□ 0.89
CD4P01730 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.64■□□□□ 0.89
CD4P01730 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
CD4P01730 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.64■□□□□ 0.89
CD4P01730 AC074051.2-201ENST00000565115 352 ntBASIC20.64■□□□□ 0.89
CD4P01730 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CD4P01730 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD4P01730 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CD4P01730 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.63■□□□□ 0.89
CD4P01730 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.63■□□□□ 0.89
CD4P01730 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.63■□□□□ 0.89
CD4P01730 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.63■□□□□ 0.89
CD4P01730 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.63■□□□□ 0.89
CD4P01730 AL353801.3-201ENST00000609898 542 ntBASIC20.63■□□□□ 0.89
CD4P01730 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.63■□□□□ 0.89
CD4P01730 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CD4P01730 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD4P01730 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
CD4P01730 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.62■□□□□ 0.89
CD4P01730 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.62■□□□□ 0.89
CD4P01730 HLA-A-201ENST00000376802 1334 ntBASIC20.62■□□□□ 0.89
CD4P01730 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.62■□□□□ 0.89
CD4P01730 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 AP003733.1-201ENST00000491725 852 ntBASIC20.62■□□□□ 0.89
CD4P01730 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.62■□□□□ 0.89
CD4P01730 AL671883.3-201ENST00000603274 991 ntBASIC20.62■□□□□ 0.89
CD4P01730 AC138894.3-201ENST00000603787 634 ntBASIC20.62■□□□□ 0.89
CD4P01730 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 IGHV3-41-201ENST00000613121 348 ntBASIC20.62■□□□□ 0.89
CD4P01730 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CD4P01730 AIRN-201ENST00000601203 4374 ntBASIC20.62■□□□□ 0.89
CD4P01730 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CD4P01730 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD4P01730 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 AC073130.3-201ENST00000624389 2278 ntBASIC20.61■□□□□ 0.89
CD4P01730 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.61■□□□□ 0.89
CD4P01730 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 IGHV3-47-201ENST00000425060 335 ntBASIC20.61■□□□□ 0.89
CD4P01730 AC079776.4-201ENST00000511039 504 ntBASIC20.61■□□□□ 0.89
CD4P01730 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.61■□□□□ 0.89
CD4P01730 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CD4P01730 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
CD4P01730 LINC00167-201ENST00000530583 1419 ntBASIC20.61■□□□□ 0.89
CD4P01730 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD4P01730 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.6■□□□□ 0.89
CD4P01730 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.6■□□□□ 0.89
CD4P01730 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CD4P01730 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms