Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RAPGEF3O95398 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RAPGEF3O95398 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC27.98■■■□□ 2.07
RAPGEF3O95398 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC27.98■■■□□ 2.07
RAPGEF3O95398 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC27.98■■■□□ 2.07
RAPGEF3O95398 CYP51A1P1-201ENST00000492267 1507 ntBASIC27.97■■■□□ 2.07
RAPGEF3O95398 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RAPGEF3O95398 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RAPGEF3O95398 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC27.97■■■□□ 2.07
RAPGEF3O95398 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RAPGEF3O95398 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC27.97■■■□□ 2.07
RAPGEF3O95398 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC27.97■■■□□ 2.07
RAPGEF3O95398 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RAPGEF3O95398 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC27.97■■■□□ 2.07
RAPGEF3O95398 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RAPGEF3O95398 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC27.97■■■□□ 2.07
RAPGEF3O95398 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC27.97■■■□□ 2.07
RAPGEF3O95398 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
RAPGEF3O95398 KATNBL1P6-202ENST00000562413 1466 ntBASIC27.96■■■□□ 2.07
RAPGEF3O95398 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
RAPGEF3O95398 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC27.96■■■□□ 2.07
RAPGEF3O95398 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC27.96■■■□□ 2.07
RAPGEF3O95398 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27.96■■■□□ 2.07
RAPGEF3O95398 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC27.96■■■□□ 2.07
RAPGEF3O95398 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27.96■■■□□ 2.07
RAPGEF3O95398 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC27.96■■■□□ 2.07
RAPGEF3O95398 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC27.96■■■□□ 2.07
RAPGEF3O95398 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RAPGEF3O95398 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RAPGEF3O95398 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.07
RAPGEF3O95398 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
RAPGEF3O95398 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RAPGEF3O95398 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.95■■■□□ 2.07
RAPGEF3O95398 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.95■■■□□ 2.07
RAPGEF3O95398 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC27.95■■■□□ 2.07
RAPGEF3O95398 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
RAPGEF3O95398 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
RAPGEF3O95398 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RAPGEF3O95398 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RAPGEF3O95398 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
RAPGEF3O95398 HLA-J-201ENST00000462773 1622 ntBASIC27.95■■■□□ 2.06
RAPGEF3O95398 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
RAPGEF3O95398 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RAPGEF3O95398 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC27.95■■■□□ 2.06
RAPGEF3O95398 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC27.94■■■□□ 2.06
RAPGEF3O95398 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC27.94■■■□□ 2.06
RAPGEF3O95398 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 AC004832.2-201ENST00000426397 482 ntBASIC27.94■■■□□ 2.06
RAPGEF3O95398 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC27.94■■■□□ 2.06
RAPGEF3O95398 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC27.94■■■□□ 2.06
RAPGEF3O95398 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC27.94■■■□□ 2.06
RAPGEF3O95398 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC27.94■■■□□ 2.06
RAPGEF3O95398 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RAPGEF3O95398 KRT18P28-201ENST00000453838 1332 ntBASIC27.93■■■□□ 2.06
RAPGEF3O95398 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RAPGEF3O95398 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RAPGEF3O95398 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC27.93■■■□□ 2.06
RAPGEF3O95398 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC27.93■■■□□ 2.06
RAPGEF3O95398 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC27.93■■■□□ 2.06
RAPGEF3O95398 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC27.93■■■□□ 2.06
RAPGEF3O95398 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC27.93■■■□□ 2.06
RAPGEF3O95398 KRT8P32-201ENST00000512863 1461 ntBASIC27.93■■■□□ 2.06
RAPGEF3O95398 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RAPGEF3O95398 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RAPGEF3O95398 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RAPGEF3O95398 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RAPGEF3O95398 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RAPGEF3O95398 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RAPGEF3O95398 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 CYMP-203ENST00000474680 1263 ntBASIC27.92■■■□□ 2.06
RAPGEF3O95398 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RAPGEF3O95398 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 PNMT-203ENST00000581428 677 ntTSL 2 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RAPGEF3O95398 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RAPGEF3O95398 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC27.92■■■□□ 2.06
RAPGEF3O95398 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RAPGEF3O95398 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms