Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX3O95343 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.29■□□□□ 0.52
SIX3O95343 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX3O95343 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SIX3O95343 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.29■□□□□ 0.52
SIX3O95343 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIX3O95343 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SIX3O95343 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SIX3O95343 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.28■□□□□ 0.52
SIX3O95343 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 FAM207BP-201ENST00000447172 505 ntBASIC18.28■□□□□ 0.52
SIX3O95343 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.28■□□□□ 0.52
SIX3O95343 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SIX3O95343 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.28■□□□□ 0.52
SIX3O95343 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 MIR6786-201ENST00000616843 113 ntBASIC18.28■□□□□ 0.52
SIX3O95343 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX3O95343 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SIX3O95343 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.28■□□□□ 0.52
SIX3O95343 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIX3O95343 RCC2P3-201ENST00000418112 1537 ntBASIC18.28■□□□□ 0.52
SIX3O95343 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.28■□□□□ 0.52
SIX3O95343 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SIX3O95343 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SIX3O95343 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 NOC2LP1-202ENST00000452600 2235 ntBASIC18.27■□□□□ 0.52
SIX3O95343 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
SIX3O95343 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX3O95343 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX3O95343 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SIX3O95343 MESTP1-201ENST00000404287 994 ntBASIC18.27■□□□□ 0.52
SIX3O95343 FAM197Y1-201ENST00000421178 764 ntBASIC18.27■□□□□ 0.52
SIX3O95343 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.27■□□□□ 0.52
SIX3O95343 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.27■□□□□ 0.52
SIX3O95343 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.27■□□□□ 0.52
SIX3O95343 ITM2C-210ENST00000620962 501 ntBASIC18.27■□□□□ 0.52
SIX3O95343 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SIX3O95343 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX3O95343 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIX3O95343 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX3O95343 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.27■□□□□ 0.52
SIX3O95343 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIX3O95343 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.27■□□□□ 0.51
SIX3O95343 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIX3O95343 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SIX3O95343 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SIX3O95343 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SIX3O95343 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIX3O95343 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX3O95343 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SIX3O95343 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX3O95343 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 KRT18P29-201ENST00000397031 1267 ntBASIC18.26■□□□□ 0.51
SIX3O95343 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.26■□□□□ 0.51
SIX3O95343 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.26■□□□□ 0.51
SIX3O95343 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.26■□□□□ 0.51
SIX3O95343 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX3O95343 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIX3O95343 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX3O95343 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX3O95343 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SIX3O95343 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.26■□□□□ 0.51
SIX3O95343 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
SIX3O95343 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms