Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC087499.1-201ENST00000418141 1075 ntBASIC17.57■□□□□ 0.4
SNX4O95219 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.57■□□□□ 0.4
SNX4O95219 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.57■□□□□ 0.4
SNX4O95219 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SNX4O95219 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX4O95219 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX4O95219 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX4O95219 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX4O95219 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SNX4O95219 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX4O95219 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX4O95219 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.56■□□□□ 0.4
SNX4O95219 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 SLC25A1P4-201ENST00000567977 778 ntBASIC17.56■□□□□ 0.4
SNX4O95219 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX4O95219 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.56■□□□□ 0.4
SNX4O95219 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNX4O95219 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX4O95219 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX4O95219 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX4O95219 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX4O95219 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SNX4O95219 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX4O95219 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX4O95219 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX4O95219 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX4O95219 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX4O95219 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX4O95219 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX4O95219 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.55■□□□□ 0.4
SNX4O95219 AC008040.2-201ENST00000461049 708 ntBASIC17.55■□□□□ 0.4
SNX4O95219 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX4O95219 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.55■□□□□ 0.4
SNX4O95219 LINC01023-201ENST00000606054 436 ntBASIC17.55■□□□□ 0.4
SNX4O95219 KRT8P41-201ENST00000533985 1514 ntBASIC17.55■□□□□ 0.4
SNX4O95219 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNX4O95219 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX4O95219 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SNX4O95219 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX4O95219 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX4O95219 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX4O95219 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNX4O95219 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.55■□□□□ 0.4
SNX4O95219 AC009113.1-201ENST00000570267 2443 ntBASIC17.55■□□□□ 0.4
SNX4O95219 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 AC096733.2-201ENST00000609937 1394 ntBASIC17.54■□□□□ 0.4
SNX4O95219 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX4O95219 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX4O95219 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX4O95219 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 AC211429.1-201ENST00000415277 523 ntBASIC17.54■□□□□ 0.4
SNX4O95219 CRYGFP-201ENST00000418459 633 ntBASIC17.54■□□□□ 0.4
SNX4O95219 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX4O95219 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX4O95219 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX4O95219 NAPSB-206ENST00000562112 1266 ntBASIC17.54■□□□□ 0.4
SNX4O95219 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX4O95219 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX4O95219 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX4O95219 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX4O95219 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX4O95219 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SNX4O95219 NOC2LP2-201ENST00000407594 1944 ntBASIC17.54■□□□□ 0.4
SNX4O95219 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms