Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.42■□□□□ 0.22
KDM4BO94953 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.42■□□□□ 0.22
KDM4BO94953 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.42■□□□□ 0.22
KDM4BO94953 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KDM4BO94953 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KDM4BO94953 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KDM4BO94953 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KDM4BO94953 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
KDM4BO94953 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KDM4BO94953 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.42■□□□□ 0.22
KDM4BO94953 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.42■□□□□ 0.22
KDM4BO94953 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KDM4BO94953 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KDM4BO94953 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.42■□□□□ 0.22
KDM4BO94953 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.41■□□□□ 0.22
KDM4BO94953 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KDM4BO94953 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KDM4BO94953 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
KDM4BO94953 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 TUBB8P6-201ENST00000436895 1288 ntBASIC16.41■□□□□ 0.22
KDM4BO94953 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.41■□□□□ 0.22
KDM4BO94953 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KDM4BO94953 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KDM4BO94953 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KDM4BO94953 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.41■□□□□ 0.22
KDM4BO94953 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KDM4BO94953 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
KDM4BO94953 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KDM4BO94953 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KDM4BO94953 ANO7L1-203ENST00000602586 1720 ntBASIC16.4■□□□□ 0.22
KDM4BO94953 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.4■□□□□ 0.22
KDM4BO94953 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.4■□□□□ 0.22
KDM4BO94953 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.4■□□□□ 0.22
KDM4BO94953 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.4■□□□□ 0.22
KDM4BO94953 UNC93B4-201ENST00000505679 747 ntBASIC16.4■□□□□ 0.22
KDM4BO94953 AC090192.1-201ENST00000517740 490 ntBASIC16.4■□□□□ 0.22
KDM4BO94953 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.4■□□□□ 0.22
KDM4BO94953 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.4■□□□□ 0.22
KDM4BO94953 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.4■□□□□ 0.22
KDM4BO94953 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
KDM4BO94953 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.4■□□□□ 0.22
KDM4BO94953 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KDM4BO94953 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
KDM4BO94953 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KDM4BO94953 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KDM4BO94953 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KDM4BO94953 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms