Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCF11O94913 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC29.1■■■□□ 2.25
PCF11O94913 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCF11O94913 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC29.1■■■□□ 2.25
PCF11O94913 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC29.1■■■□□ 2.25
PCF11O94913 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCF11O94913 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
PCF11O94913 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC29.1■■■□□ 2.25
PCF11O94913 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC29.09■■■□□ 2.25
PCF11O94913 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC29.09■■■□□ 2.25
PCF11O94913 AC091607.1-201ENST00000490318 1060 ntBASIC29.09■■■□□ 2.25
PCF11O94913 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
PCF11O94913 ADM-207ENST00000530439 1839 ntTSL 2 BASIC29.09■■■□□ 2.25
PCF11O94913 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 UROS-202ENST00000368778 1556 ntTSL 2 BASIC29.09■■■□□ 2.25
PCF11O94913 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
PCF11O94913 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 KRT89P-201ENST00000620027 1478 ntBASIC29.09■■■□□ 2.25
PCF11O94913 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 AC233702.3-201ENST00000578656 1387 ntBASIC29.09■■■□□ 2.25
PCF11O94913 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC29.09■■■□□ 2.25
PCF11O94913 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC29.09■■■□□ 2.25
PCF11O94913 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
PCF11O94913 AC074051.2-201ENST00000565115 352 ntBASIC29.09■■■□□ 2.25
PCF11O94913 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC29.09■■■□□ 2.25
PCF11O94913 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC29.09■■■□□ 2.25
PCF11O94913 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCF11O94913 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC29.09■■■□□ 2.25
PCF11O94913 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCF11O94913 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC29.08■■■□□ 2.25
PCF11O94913 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
PCF11O94913 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCF11O94913 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCF11O94913 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCF11O94913 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCF11O94913 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
PCF11O94913 AC079781.3-201ENST00000449110 356 ntBASIC29.08■■■□□ 2.25
PCF11O94913 AC138894.3-201ENST00000603787 634 ntBASIC29.08■■■□□ 2.25
PCF11O94913 GXYLT1P4-201ENST00000613576 1192 ntBASIC29.08■■■□□ 2.25
PCF11O94913 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC29.08■■■□□ 2.25
PCF11O94913 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCF11O94913 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCF11O94913 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC29.07■■■□□ 2.24
PCF11O94913 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCF11O94913 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC29.07■■■□□ 2.24
PCF11O94913 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCF11O94913 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCF11O94913 TSPY12P-201ENST00000421279 868 ntBASIC29.07■■■□□ 2.24
PCF11O94913 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCF11O94913 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
PCF11O94913 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC29.07■■■□□ 2.24
PCF11O94913 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
PCF11O94913 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
PCF11O94913 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
PCF11O94913 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC29.06■■■□□ 2.24
PCF11O94913 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC29.06■■■□□ 2.24
PCF11O94913 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
PCF11O94913 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC29.06■■■□□ 2.24
PCF11O94913 AP000867.3-201ENST00000524675 377 ntBASIC29.06■■■□□ 2.24
PCF11O94913 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PCF11O94913 PNN-202ENST00000553331 656 ntTSL 3 BASIC29.06■■■□□ 2.24
PCF11O94913 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC29.06■■■□□ 2.24
PCF11O94913 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
PCF11O94913 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PCF11O94913 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
PCF11O94913 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC29.05■■■□□ 2.24
PCF11O94913 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC29.05■■■□□ 2.24
PCF11O94913 TSPY19P-201ENST00000418461 509 ntBASIC29.05■■■□□ 2.24
PCF11O94913 TSPY18P-201ENST00000441642 509 ntBASIC29.05■■■□□ 2.24
PCF11O94913 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCF11O94913 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCF11O94913 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCF11O94913 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
PCF11O94913 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
PCF11O94913 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
PCF11O94913 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC29.05■■■□□ 2.24
PCF11O94913 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC29.05■■■□□ 2.24
PCF11O94913 BET1L-206ENST00000486280 665 ntTSL 3 BASIC29.05■■■□□ 2.24
PCF11O94913 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC29.05■■■□□ 2.24
PCF11O94913 AC005332.3-201ENST00000589904 676 ntBASIC29.05■■■□□ 2.24
PCF11O94913 AC024563.2-201ENST00000603282 481 ntBASIC29.05■■■□□ 2.24
PCF11O94913 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCF11O94913 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCF11O94913 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC29.04■■■□□ 2.24
PCF11O94913 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCF11O94913 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC29.04■■■□□ 2.24
PCF11O94913 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCF11O94913 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCF11O94913 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCF11O94913 PPOX-214ENST00000535223 664 ntTSL 3 BASIC29.04■■■□□ 2.24
PCF11O94913 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
PCF11O94913 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCF11O94913 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms