Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AF186192.3-201ENST00000583427 947 ntBASIC18.92■□□□□ 0.62
USP1O94782 AC073195.1-201ENST00000607241 877 ntBASIC18.92■□□□□ 0.62
USP1O94782 AC011298.2-201ENST00000617989 482 ntBASIC18.92■□□□□ 0.62
USP1O94782 CR392000.1-201ENST00000624770 1228 ntBASIC18.92■□□□□ 0.62
USP1O94782 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.92■□□□□ 0.62
USP1O94782 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
USP1O94782 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP1O94782 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.91■□□□□ 0.62
USP1O94782 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
USP1O94782 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
USP1O94782 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 AL390961.4-201ENST00000623958 2535 ntBASIC18.91■□□□□ 0.62
USP1O94782 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.91■□□□□ 0.62
USP1O94782 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
USP1O94782 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
USP1O94782 AL158047.1-201ENST00000445918 881 ntBASIC18.91■□□□□ 0.62
USP1O94782 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.91■□□□□ 0.62
USP1O94782 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
USP1O94782 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
USP1O94782 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
USP1O94782 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP1O94782 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.91■□□□□ 0.62
USP1O94782 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.91■□□□□ 0.62
USP1O94782 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP1O94782 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.91■□□□□ 0.62
USP1O94782 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP1O94782 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP1O94782 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
USP1O94782 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.9■□□□□ 0.62
USP1O94782 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.9■□□□□ 0.62
USP1O94782 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.9■□□□□ 0.62
USP1O94782 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP1O94782 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.9■□□□□ 0.62
USP1O94782 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.9■□□□□ 0.62
USP1O94782 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
USP1O94782 AC126763.1-201ENST00000552015 2118 ntBASIC18.9■□□□□ 0.62
USP1O94782 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP1O94782 CKBP1-201ENST00000565489 1086 ntBASIC18.9■□□□□ 0.62
USP1O94782 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.9■□□□□ 0.62
USP1O94782 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.9■□□□□ 0.62
USP1O94782 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.9■□□□□ 0.62
USP1O94782 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP1O94782 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP1O94782 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP1O94782 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP1O94782 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP1O94782 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP1O94782 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
USP1O94782 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP1O94782 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
USP1O94782 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
USP1O94782 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP1O94782 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP1O94782 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
USP1O94782 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms