Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.77■□□□□ 0.6
RFPL1O75677 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.77■□□□□ 0.6
RFPL1O75677 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.77■□□□□ 0.6
RFPL1O75677 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.77■□□□□ 0.6
RFPL1O75677 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.77■□□□□ 0.6
RFPL1O75677 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RFPL1O75677 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RFPL1O75677 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.77■□□□□ 0.6
RFPL1O75677 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.77■□□□□ 0.6
RFPL1O75677 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.77■□□□□ 0.6
RFPL1O75677 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.77■□□□□ 0.6
RFPL1O75677 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.77■□□□□ 0.6
RFPL1O75677 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.77■□□□□ 0.6
RFPL1O75677 AC068587.9-201ENST00000641814 219 ntBASIC18.77■□□□□ 0.6
RFPL1O75677 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.77■□□□□ 0.6
RFPL1O75677 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFPL1O75677 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RFPL1O75677 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
RFPL1O75677 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFPL1O75677 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RFPL1O75677 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
RFPL1O75677 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
RFPL1O75677 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.77■□□□□ 0.59
RFPL1O75677 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 AP000997.3-201ENST00000623333 2250 ntBASIC18.76■□□□□ 0.59
RFPL1O75677 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.76■□□□□ 0.59
RFPL1O75677 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RFPL1O75677 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
RFPL1O75677 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.76■□□□□ 0.59
RFPL1O75677 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.76■□□□□ 0.59
RFPL1O75677 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.76■□□□□ 0.59
RFPL1O75677 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.76■□□□□ 0.59
RFPL1O75677 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.76■□□□□ 0.59
RFPL1O75677 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.76■□□□□ 0.59
RFPL1O75677 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.76■□□□□ 0.59
RFPL1O75677 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RFPL1O75677 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.76■□□□□ 0.59
RFPL1O75677 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RFPL1O75677 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.76■□□□□ 0.59
RFPL1O75677 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.76■□□□□ 0.59
RFPL1O75677 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFPL1O75677 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RFPL1O75677 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.75■□□□□ 0.59
RFPL1O75677 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.75■□□□□ 0.59
RFPL1O75677 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.75■□□□□ 0.59
RFPL1O75677 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.75■□□□□ 0.59
RFPL1O75677 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.75■□□□□ 0.59
RFPL1O75677 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.75■□□□□ 0.59
RFPL1O75677 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.75■□□□□ 0.59
RFPL1O75677 AL355075.4-201ENST00000554988 638 ntBASIC18.75■□□□□ 0.59
RFPL1O75677 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.75■□□□□ 0.59
RFPL1O75677 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.75■□□□□ 0.59
RFPL1O75677 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RFPL1O75677 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RFPL1O75677 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RFPL1O75677 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RFPL1O75677 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.75■□□□□ 0.59
RFPL1O75677 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RFPL1O75677 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFPL1O75677 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL1O75677 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RFPL1O75677 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL1O75677 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.74■□□□□ 0.59
RFPL1O75677 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RFPL1O75677 AC008764.6-201ENST00000595909 2069 ntBASIC18.74■□□□□ 0.59
RFPL1O75677 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms