Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.64■□□□□ 0.58
NDUFS3O75489 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.64■□□□□ 0.57
NDUFS3O75489 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
NDUFS3O75489 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NDUFS3O75489 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.64■□□□□ 0.57
NDUFS3O75489 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
NDUFS3O75489 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.64■□□□□ 0.57
NDUFS3O75489 RBM17P1-201ENST00000453646 1190 ntBASIC18.64■□□□□ 0.57
NDUFS3O75489 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.64■□□□□ 0.57
NDUFS3O75489 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.64■□□□□ 0.57
NDUFS3O75489 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.64■□□□□ 0.57
NDUFS3O75489 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
NDUFS3O75489 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
NDUFS3O75489 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.64■□□□□ 0.57
NDUFS3O75489 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDUFS3O75489 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NDUFS3O75489 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.63■□□□□ 0.57
NDUFS3O75489 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NDUFS3O75489 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.63■□□□□ 0.57
NDUFS3O75489 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 CA15P1-201ENST00000481698 905 ntBASIC18.63■□□□□ 0.57
NDUFS3O75489 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NDUFS3O75489 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.63■□□□□ 0.57
NDUFS3O75489 AP005242.2-201ENST00000580065 1175 ntBASIC18.63■□□□□ 0.57
NDUFS3O75489 AC008622.2-201ENST00000617006 1229 ntBASIC18.63■□□□□ 0.57
NDUFS3O75489 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.63■□□□□ 0.57
NDUFS3O75489 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NDUFS3O75489 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
NDUFS3O75489 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NDUFS3O75489 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NDUFS3O75489 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
NDUFS3O75489 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.63■□□□□ 0.57
NDUFS3O75489 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDUFS3O75489 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NDUFS3O75489 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NDUFS3O75489 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.62■□□□□ 0.57
NDUFS3O75489 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.62■□□□□ 0.57
NDUFS3O75489 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NDUFS3O75489 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NDUFS3O75489 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.62■□□□□ 0.57
NDUFS3O75489 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.62■□□□□ 0.57
NDUFS3O75489 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.62■□□□□ 0.57
NDUFS3O75489 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.62■□□□□ 0.57
NDUFS3O75489 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.62■□□□□ 0.57
NDUFS3O75489 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDUFS3O75489 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.61■□□□□ 0.57
NDUFS3O75489 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.61■□□□□ 0.57
NDUFS3O75489 AL357033.4-201ENST00000617703 1807 ntBASIC18.61■□□□□ 0.57
NDUFS3O75489 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NDUFS3O75489 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.61■□□□□ 0.57
NDUFS3O75489 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDUFS3O75489 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms