Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.81■■□□□ 1.08
CTNND1O60716 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.81■■□□□ 1.08
CTNND1O60716 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 KRT18P31-201ENST00000506277 1292 ntBASIC21.81■■□□□ 1.08
CTNND1O60716 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.81■■□□□ 1.08
CTNND1O60716 GPR32P1-201ENST00000601788 811 ntBASIC21.81■■□□□ 1.08
CTNND1O60716 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CTNND1O60716 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CTNND1O60716 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.81■■□□□ 1.08
CTNND1O60716 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 RNF165-205ENST00000588679 2904 ntBASIC21.81■■□□□ 1.08
CTNND1O60716 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CTNND1O60716 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CTNND1O60716 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CTNND1O60716 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.8■■□□□ 1.08
CTNND1O60716 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.8■■□□□ 1.08
CTNND1O60716 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.8■■□□□ 1.08
CTNND1O60716 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.8■■□□□ 1.08
CTNND1O60716 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.8■■□□□ 1.08
CTNND1O60716 LINC01711-201ENST00000598340 967 ntBASIC21.8■■□□□ 1.08
CTNND1O60716 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.8■■□□□ 1.08
CTNND1O60716 AC068587.9-201ENST00000641814 219 ntBASIC21.8■■□□□ 1.08
CTNND1O60716 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.8■■□□□ 1.08
CTNND1O60716 AC141586.3-201ENST00000562166 1838 ntBASIC21.8■■□□□ 1.08
CTNND1O60716 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CTNND1O60716 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTNND1O60716 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.8■■□□□ 1.08
CTNND1O60716 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.79■■□□□ 1.08
CTNND1O60716 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.79■■□□□ 1.08
CTNND1O60716 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CTNND1O60716 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CTNND1O60716 IGHGP-201ENST00000390555 1178 ntBASIC21.79■■□□□ 1.08
CTNND1O60716 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.79■■□□□ 1.08
CTNND1O60716 AC104819.1-201ENST00000504587 486 ntBASIC21.79■■□□□ 1.08
CTNND1O60716 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.79■■□□□ 1.08
CTNND1O60716 AC104692.2-201ENST00000603054 253 ntBASIC21.79■■□□□ 1.08
CTNND1O60716 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.79■■□□□ 1.08
CTNND1O60716 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTNND1O60716 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.79■■□□□ 1.08
CTNND1O60716 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CTNND1O60716 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CTNND1O60716 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
CTNND1O60716 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 AC233702.3-201ENST00000578656 1387 ntBASIC21.78■■□□□ 1.08
CTNND1O60716 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CTNND1O60716 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.78■■□□□ 1.08
CTNND1O60716 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND1O60716 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.78■■□□□ 1.08
CTNND1O60716 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND1O60716 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.78■■□□□ 1.08
CTNND1O60716 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 AL031008.1-201ENST00000619963 541 ntBASIC21.78■■□□□ 1.08
CTNND1O60716 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.78■■□□□ 1.08
CTNND1O60716 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.78■■□□□ 1.08
CTNND1O60716 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CTNND1O60716 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTNND1O60716 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CTNND1O60716 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.77■■□□□ 1.08
CTNND1O60716 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.77■■□□□ 1.08
CTNND1O60716 AL160237.2-201ENST00000556165 472 ntBASIC21.77■■□□□ 1.08
CTNND1O60716 AC024563.2-201ENST00000603282 481 ntBASIC21.77■■□□□ 1.08
CTNND1O60716 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTNND1O60716 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
CTNND1O60716 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms