Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.63■□□□□ 0.41
PLOD3O60568 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.63■□□□□ 0.41
PLOD3O60568 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PLOD3O60568 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.63■□□□□ 0.41
PLOD3O60568 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.63■□□□□ 0.41
PLOD3O60568 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PLOD3O60568 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PLOD3O60568 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PLOD3O60568 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PLOD3O60568 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PLOD3O60568 KRT8P32-201ENST00000512863 1461 ntBASIC17.63■□□□□ 0.41
PLOD3O60568 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
PLOD3O60568 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.62■□□□□ 0.41
PLOD3O60568 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.62■□□□□ 0.41
PLOD3O60568 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 RBM17P1-201ENST00000453646 1190 ntBASIC17.62■□□□□ 0.41
PLOD3O60568 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.62■□□□□ 0.41
PLOD3O60568 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.62■□□□□ 0.41
PLOD3O60568 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PLOD3O60568 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PLOD3O60568 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PLOD3O60568 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.61■□□□□ 0.41
PLOD3O60568 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PLOD3O60568 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 AL031598.1-201ENST00000561511 1773 ntBASIC17.61■□□□□ 0.41
PLOD3O60568 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.61■□□□□ 0.41
PLOD3O60568 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 AL512353.2-201ENST00000448759 1962 ntBASIC17.61■□□□□ 0.41
PLOD3O60568 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.61■□□□□ 0.41
PLOD3O60568 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PLOD3O60568 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.61■□□□□ 0.41
PLOD3O60568 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.61■□□□□ 0.41
PLOD3O60568 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.61■□□□□ 0.41
PLOD3O60568 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PLOD3O60568 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.61■□□□□ 0.41
PLOD3O60568 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
PLOD3O60568 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.61■□□□□ 0.41
PLOD3O60568 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
PLOD3O60568 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.61■□□□□ 0.41
PLOD3O60568 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PLOD3O60568 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PLOD3O60568 Z98044.1-201ENST00000632503 1764 ntBASIC17.61■□□□□ 0.41
PLOD3O60568 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
PLOD3O60568 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
PLOD3O60568 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PLOD3O60568 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PLOD3O60568 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PLOD3O60568 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
PLOD3O60568 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PLOD3O60568 CRYGFP-201ENST00000418459 633 ntBASIC17.6■□□□□ 0.41
PLOD3O60568 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.6■□□□□ 0.41
PLOD3O60568 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.6■□□□□ 0.41
PLOD3O60568 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PLOD3O60568 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.6■□□□□ 0.41
PLOD3O60568 AC068587.9-201ENST00000641814 219 ntBASIC17.6■□□□□ 0.41
PLOD3O60568 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 HEIH-201ENST00000623091 1652 ntBASIC17.6■□□□□ 0.41
PLOD3O60568 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.6■□□□□ 0.41
PLOD3O60568 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.6■□□□□ 0.41
PLOD3O60568 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PLOD3O60568 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PLOD3O60568 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms