Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.98□□□□□ -0.17
SNAI2O43623 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.98□□□□□ -0.17
SNAI2O43623 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.98□□□□□ -0.17
SNAI2O43623 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.98□□□□□ -0.17
SNAI2O43623 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.98□□□□□ -0.17
SNAI2O43623 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.98□□□□□ -0.17
SNAI2O43623 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
SNAI2O43623 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SNAI2O43623 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.98□□□□□ -0.17
SNAI2O43623 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.98□□□□□ -0.17
SNAI2O43623 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.98□□□□□ -0.17
SNAI2O43623 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SNAI2O43623 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SNAI2O43623 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SNAI2O43623 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.97□□□□□ -0.17
SNAI2O43623 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.97□□□□□ -0.17
SNAI2O43623 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.97□□□□□ -0.17
SNAI2O43623 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.97□□□□□ -0.17
SNAI2O43623 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.97□□□□□ -0.17
SNAI2O43623 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.97□□□□□ -0.17
SNAI2O43623 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.97□□□□□ -0.17
SNAI2O43623 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SNAI2O43623 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SNAI2O43623 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.97□□□□□ -0.17
SNAI2O43623 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 PCDHA12-202ENST00000613593 2588 ntBASIC13.97□□□□□ -0.17
SNAI2O43623 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SNAI2O43623 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.97□□□□□ -0.17
SNAI2O43623 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SNAI2O43623 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SNAI2O43623 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.96□□□□□ -0.17
SNAI2O43623 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.96□□□□□ -0.17
SNAI2O43623 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
SNAI2O43623 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SNAI2O43623 KRT18P5-201ENST00000436075 1291 ntBASIC13.96□□□□□ -0.17
SNAI2O43623 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 MIR6821-201ENST00000617625 74 ntBASIC13.96□□□□□ -0.17
SNAI2O43623 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.96□□□□□ -0.17
SNAI2O43623 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SNAI2O43623 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SNAI2O43623 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.96□□□□□ -0.17
SNAI2O43623 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SNAI2O43623 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNAI2O43623 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SNAI2O43623 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SNAI2O43623 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.96□□□□□ -0.18
SNAI2O43623 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNAI2O43623 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNAI2O43623 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNAI2O43623 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
SNAI2O43623 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNAI2O43623 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms