Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH17O14917 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
PCDH17O14917 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDH17O14917 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH17O14917 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH17O14917 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH17O14917 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDH17O14917 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH17O14917 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PCDH17O14917 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDH17O14917 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH17O14917 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDH17O14917 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH17O14917 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDH17O14917 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH17O14917 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH17O14917 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDH17O14917 AC020763.4-201ENST00000623414 4170 ntBASIC17.83■□□□□ 0.45
PCDH17O14917 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDH17O14917 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 AP000523.1-201ENST00000398242 1049 ntBASIC17.83■□□□□ 0.44
PCDH17O14917 KRT18P57-201ENST00000443599 1254 ntBASIC17.83■□□□□ 0.44
PCDH17O14917 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
PCDH17O14917 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDH17O14917 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH17O14917 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 AC009113.1-201ENST00000570267 2443 ntBASIC17.83■□□□□ 0.44
PCDH17O14917 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDH17O14917 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDH17O14917 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDH17O14917 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PCDH17O14917 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
PCDH17O14917 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH17O14917 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH17O14917 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDH17O14917 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
PCDH17O14917 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDH17O14917 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDH17O14917 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH17O14917 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDH17O14917 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDH17O14917 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH17O14917 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDH17O14917 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms