Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SOX1O00570 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.85■□□□□ 0.77
SOX1O00570 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SOX1O00570 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.85■□□□□ 0.77
SOX1O00570 KRT18P2-201ENST00000447938 1258 ntBASIC19.85■□□□□ 0.77
SOX1O00570 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.85■□□□□ 0.77
SOX1O00570 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 AC190387.1-201ENST00000551683 408 ntBASIC19.85■□□□□ 0.77
SOX1O00570 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.85■□□□□ 0.77
SOX1O00570 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.85■□□□□ 0.77
SOX1O00570 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.85■□□□□ 0.77
SOX1O00570 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SOX1O00570 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SOX1O00570 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SOX1O00570 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SOX1O00570 HOXB1-202ENST00000577092 1414 ntBASIC19.85■□□□□ 0.77
SOX1O00570 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.84■□□□□ 0.77
SOX1O00570 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.84■□□□□ 0.77
SOX1O00570 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.84■□□□□ 0.77
SOX1O00570 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.84■□□□□ 0.77
SOX1O00570 AC015922.1-201ENST00000421102 1152 ntBASIC19.84■□□□□ 0.77
SOX1O00570 HLA-V-201ENST00000429037 534 ntBASIC19.84■□□□□ 0.77
SOX1O00570 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.84■□□□□ 0.77
SOX1O00570 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.84■□□□□ 0.77
SOX1O00570 MIR4745-201ENST00000577608 62 ntBASIC19.84■□□□□ 0.77
SOX1O00570 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.84■□□□□ 0.77
SOX1O00570 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.84■□□□□ 0.77
SOX1O00570 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SOX1O00570 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.84■□□□□ 0.77
SOX1O00570 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SOX1O00570 KRT8P7-201ENST00000533003 1432 ntBASIC19.84■□□□□ 0.77
SOX1O00570 AP005117.1-201ENST00000584346 1413 ntBASIC19.84■□□□□ 0.77
SOX1O00570 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SOX1O00570 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.83■□□□□ 0.77
SOX1O00570 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.83■□□□□ 0.77
SOX1O00570 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.83■□□□□ 0.77
SOX1O00570 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.83■□□□□ 0.77
SOX1O00570 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SOX1O00570 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SOX1O00570 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SOX1O00570 AC093512.1-201ENST00000617969 520 ntBASIC19.83■□□□□ 0.77
SOX1O00570 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.83■□□□□ 0.77
SOX1O00570 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SOX1O00570 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SOX1O00570 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.83■□□□□ 0.76
SOX1O00570 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.83■□□□□ 0.76
SOX1O00570 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.83■□□□□ 0.76
SOX1O00570 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SOX1O00570 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.82■□□□□ 0.76
SOX1O00570 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SOX1O00570 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.82■□□□□ 0.76
SOX1O00570 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.82■□□□□ 0.76
SOX1O00570 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.82■□□□□ 0.76
SOX1O00570 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SOX1O00570 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SOX1O00570 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SOX1O00570 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.82■□□□□ 0.76
SOX1O00570 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.82■□□□□ 0.76
SOX1O00570 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.81■□□□□ 0.76
SOX1O00570 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms