Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
O00370 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.92■□□□□ 0.78
O00370 AC093525.10-201ENST00000625130 1569 ntBASIC19.92■□□□□ 0.78
O00370 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
O00370 AC009113.1-201ENST00000570267 2443 ntBASIC19.92■□□□□ 0.78
O00370 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
O00370 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.92■□□□□ 0.78
O00370 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.92■□□□□ 0.78
O00370 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 ECEL1P2-202ENST00000465689 757 ntBASIC19.92■□□□□ 0.78
O00370 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
O00370 AC128688.1-201ENST00000487626 519 ntBASIC19.92■□□□□ 0.78
O00370 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.92■□□□□ 0.78
O00370 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 AC133561.5-201ENST00000635547 218 ntBASIC19.92■□□□□ 0.78
O00370 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.92■□□□□ 0.78
O00370 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 AIRN-201ENST00000601203 4374 ntBASIC19.92■□□□□ 0.78
O00370 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.92■□□□□ 0.78
O00370 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.92■□□□□ 0.78
O00370 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.92■□□□□ 0.78
O00370 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
O00370 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
O00370 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.91■□□□□ 0.78
O00370 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.91■□□□□ 0.78
O00370 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
O00370 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
O00370 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
O00370 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
O00370 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
O00370 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.91■□□□□ 0.78
O00370 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.91■□□□□ 0.78
O00370 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
O00370 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.91■□□□□ 0.78
O00370 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.91■□□□□ 0.78
O00370 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
O00370 AC008556.1-201ENST00000610908 2040 ntBASIC19.91■□□□□ 0.78
O00370 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
O00370 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
O00370 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.91■□□□□ 0.78
O00370 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
O00370 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.91■□□□□ 0.78
O00370 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.9■□□□□ 0.78
O00370 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.9■□□□□ 0.78
O00370 AC211429.1-201ENST00000415277 523 ntBASIC19.9■□□□□ 0.78
O00370 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.9■□□□□ 0.78
O00370 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 MCCD1P1-208ENST00000445732 328 ntBASIC19.9■□□□□ 0.78
O00370 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.9■□□□□ 0.78
O00370 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.9■□□□□ 0.78
O00370 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.9■□□□□ 0.78
O00370 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.9■□□□□ 0.78
O00370 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.9■□□□□ 0.78
O00370 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.9■□□□□ 0.78
O00370 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
O00370 KRT18P22-201ENST00000402024 1347 ntBASIC19.9■□□□□ 0.78
O00370 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
O00370 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.9■□□□□ 0.78
O00370 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
O00370 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.9■□□□□ 0.78
O00370 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
O00370 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.9■□□□□ 0.78
O00370 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
O00370 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.9■□□□□ 0.78
O00370 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
O00370 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.89■□□□□ 0.77
O00370 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.89■□□□□ 0.77
O00370 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.89■□□□□ 0.77
O00370 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
O00370 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.89■□□□□ 0.77
O00370 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.89■□□□□ 0.77
O00370 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.89■□□□□ 0.77
O00370 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
O00370 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
O00370 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms