Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.5■□□□□ 0.55
TLR4O00206 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
TLR4O00206 TSSC2-201ENST00000450217 709 ntBASIC18.5■□□□□ 0.55
TLR4O00206 BX276092.5-203ENST00000456199 560 ntBASIC18.5■□□□□ 0.55
TLR4O00206 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.5■□□□□ 0.55
TLR4O00206 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.5■□□□□ 0.55
TLR4O00206 AC092329.2-201ENST00000598402 547 ntBASIC18.5■□□□□ 0.55
TLR4O00206 AL121672.3-201ENST00000608644 468 ntBASIC18.5■□□□□ 0.55
TLR4O00206 AL691432.3-201ENST00000621860 400 ntBASIC18.5■□□□□ 0.55
TLR4O00206 AC012313.10-201ENST00000623509 926 ntBASIC18.5■□□□□ 0.55
TLR4O00206 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TLR4O00206 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TLR4O00206 AC125437.2-201ENST00000625180 2167 ntBASIC18.49■□□□□ 0.55
TLR4O00206 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TLR4O00206 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TLR4O00206 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TLR4O00206 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TLR4O00206 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.49■□□□□ 0.55
TLR4O00206 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.49■□□□□ 0.55
TLR4O00206 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 AC079602.3-201ENST00000623931 403 ntBASIC18.49■□□□□ 0.55
TLR4O00206 AL157888.1-201ENST00000631930 593 ntBASIC18.49■□□□□ 0.55
TLR4O00206 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 BX323043.1-201ENST00000641006 1765 ntBASIC18.49■□□□□ 0.55
TLR4O00206 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.49■□□□□ 0.55
TLR4O00206 AL158211.5-201ENST00000623583 2518 ntBASIC18.49■□□□□ 0.55
TLR4O00206 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TLR4O00206 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TLR4O00206 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TLR4O00206 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TLR4O00206 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
TLR4O00206 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.48■□□□□ 0.55
TLR4O00206 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TLR4O00206 AC016734.2-201ENST00000624325 1377 ntBASIC18.48■□□□□ 0.55
TLR4O00206 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TLR4O00206 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 AC026396.1-201ENST00000419388 421 ntBASIC18.48■□□□□ 0.55
TLR4O00206 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.48■□□□□ 0.55
TLR4O00206 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.48■□□□□ 0.55
TLR4O00206 MIR3917-201ENST00000580971 93 ntBASIC18.48■□□□□ 0.55
TLR4O00206 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.48■□□□□ 0.55
TLR4O00206 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TLR4O00206 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.48■□□□□ 0.55
TLR4O00206 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TLR4O00206 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TLR4O00206 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TLR4O00206 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TLR4O00206 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TLR4O00206 AL109659.2-201ENST00000606809 1674 ntBASIC18.47■□□□□ 0.55
TLR4O00206 AL162741.1-201ENST00000565563 1558 ntBASIC18.47■□□□□ 0.55
TLR4O00206 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.47■□□□□ 0.55
TLR4O00206 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TLR4O00206 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
TLR4O00206 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TLR4O00206 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.47■□□□□ 0.55
TLR4O00206 HLA-F-220ENST00000434407 884 ntBASIC18.47■□□□□ 0.55
TLR4O00206 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.47■□□□□ 0.55
TLR4O00206 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.47■□□□□ 0.55
TLR4O00206 MIR3652-201ENST00000579335 131 ntBASIC18.47■□□□□ 0.55
TLR4O00206 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.47■□□□□ 0.55
TLR4O00206 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.47■□□□□ 0.55
TLR4O00206 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.47■□□□□ 0.55
TLR4O00206 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
TLR4O00206 TREX1-205ENST00000625293 1783 ntBASIC18.47■□□□□ 0.55
TLR4O00206 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TLR4O00206 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.47■□□□□ 0.55
TLR4O00206 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms