Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AC128676.1-201ENST00000454392 318 ntBASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 AL499627.1-201ENST00000569373 2188 ntBASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 AL354751.1-201ENST00000412768 1863 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 AC091390.4-202ENST00000476426 537 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 PRSS44-201ENST00000515154 1146 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 MIR4651-201ENST00000582622 73 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms