Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AC128676.1-201ENST00000454392 318 ntBASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPSF4LA6NMK7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.27■□□□□ 0.35
CPSF4LA6NMK7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 AL499627.1-201ENST00000569373 2188 ntBASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPSF4LA6NMK7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 AL354751.1-201ENST00000412768 1863 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 AC091390.4-202ENST00000476426 537 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 PRSS44-201ENST00000515154 1146 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 MIR4651-201ENST00000582622 73 ntBASIC17.25■□□□□ 0.35
CPSF4LA6NMK7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms