Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC28.7■■■□□ 2.19
PLEKHD1A6NEE1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
PLEKHD1A6NEE1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
PLEKHD1A6NEE1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 RNPS1P1-201ENST00000507437 918 ntBASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PLEKHD1A6NEE1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PLEKHD1A6NEE1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 AC243591.1-201ENST00000452967 1364 ntBASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 AC114341.1-201ENST00000618070 349 ntBASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC28.68■■■□□ 2.18
PLEKHD1A6NEE1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 AC132008.2-207ENST00000454517 770 ntBASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 AC018712.1-201ENST00000455767 687 ntBASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 KRT8P50-201ENST00000562022 1438 ntBASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC28.67■■■□□ 2.18
PLEKHD1A6NEE1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 FP475955.4-201ENST00000623131 1990 ntBASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 Z98044.1-201ENST00000632503 1764 ntBASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 AC093909.1-201ENST00000504731 1122 ntBASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 AC008608.2-201ENST00000606089 416 ntBASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC28.66■■■□□ 2.18
PLEKHD1A6NEE1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 CCS-201ENST00000310190 942 ntTSL 5 BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
PLEKHD1A6NEE1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms