Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV5-4A0A0C4DH59 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 TERF1P1-201ENST00000311003 1181 ntBASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-4A0A0C4DH59 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 SEC1P-202ENST00000473944 940 ntBASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-4A0A0C4DH59 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 MIR3180-4-201ENST00000582223 153 ntBASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC090164.3-201ENST00000610780 2143 ntBASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-4A0A0C4DH59 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms