Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 AC005082.1-201ENST00000413042 2259 ntBASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV12-3A0A0B4J271 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 HTR7P1-201ENST00000538670 1336 ntBASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 ANO7L1-203ENST00000602586 1720 ntBASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 Z85996.1-201ENST00000494644 937 ntBASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 MIR4651-201ENST00000582622 73 ntBASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 AC090164.3-201ENST00000610780 2143 ntBASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV12-3A0A0B4J271 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 NIFKP9-201ENST00000419265 221 ntBASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 POU5F1P3-201ENST00000428824 1078 ntBASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 AL445675.2-201ENST00000620291 557 ntBASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 AC007613.1-201ENST00000572811 2597 ntBASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV12-3A0A0B4J271 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms