Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC4Q9Y5F7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.88■□□□□ 0.61
PCDHGC4Q9Y5F7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC4Q9Y5F7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC4Q9Y5F7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC4Q9Y5F7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC4Q9Y5F7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGC4Q9Y5F7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 MIR564-202ENST00000385049 94 ntBASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 AC004408.2-201ENST00000623613 2777 ntBASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGC4Q9Y5F7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 AC093503.3-201ENST00000624917 2352 ntBASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGC4Q9Y5F7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGC4Q9Y5F7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 Z98044.1-201ENST00000632503 1764 ntBASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 TMPOP1-202ENST00000424642 1267 ntBASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGC4Q9Y5F7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms