Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 RCC2P3-201ENST00000418112 1537 ntBASIC21.12■□□□□ 0.97
TRIM17Q9Y577 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM17Q9Y577 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 DNAJB3-202ENST00000449667 1266 ntBASIC21.11■□□□□ 0.97
TRIM17Q9Y577 AC040169.1-201ENST00000565382 521 ntBASIC21.11■□□□□ 0.97
TRIM17Q9Y577 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TRIM17Q9Y577 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 RBM17P3-201ENST00000417687 1192 ntBASIC21.1■□□□□ 0.97
TRIM17Q9Y577 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM17Q9Y577 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 AC092910.1-201ENST00000482027 1129 ntBASIC21.09■□□□□ 0.97
TRIM17Q9Y577 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM17Q9Y577 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 RCN1P2-201ENST00000398357 915 ntBASIC21.08■□□□□ 0.97
TRIM17Q9Y577 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 MIR3180-4-201ENST00000582223 153 ntBASIC21.08■□□□□ 0.97
TRIM17Q9Y577 Z83851.2-201ENST00000609564 659 ntBASIC21.08■□□□□ 0.97
TRIM17Q9Y577 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM17Q9Y577 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM17Q9Y577 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms