Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 AC024243.1-201ENST00000609234 778 ntBASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SPHK1Q9NYA1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SPHK1Q9NYA1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
SPHK1Q9NYA1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SPHK1Q9NYA1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 AC063952.2-201ENST00000498792 1227 ntBASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 AL031432.5-201ENST00000641059 760 ntBASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SPHK1Q9NYA1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18■□□□□ 0.47
SPHK1Q9NYA1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SPHK1Q9NYA1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18■□□□□ 0.47
SPHK1Q9NYA1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SPHK1Q9NYA1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 AP000523.1-201ENST00000398242 1049 ntBASIC18■□□□□ 0.47
SPHK1Q9NYA1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 AC022616.7-201ENST00000525383 220 ntBASIC18■□□□□ 0.47
SPHK1Q9NYA1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPHK1Q9NYA1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SPHK1Q9NYA1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 Z98044.1-201ENST00000632503 1764 ntBASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 NTF6B-201ENST00000591913 560 ntBASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 AC112497.1-201ENST00000624824 639 ntBASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 AC098818.2-201ENST00000564925 2320 ntBASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPHK1Q9NYA1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 KRT18P23-201ENST00000435622 1283 ntBASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 SEC1P-202ENST00000473944 940 ntBASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.98■□□□□ 0.47
SPHK1Q9NYA1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms