Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 AC141586.3-201ENST00000562166 1838 ntBASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCFC1R1Q9NWW0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 KRT17P6-201ENST00000453795 1220 ntBASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 AC012615.1-201ENST00000565797 1299 ntBASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 AL031008.1-201ENST00000619963 541 ntBASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCFC1R1Q9NWW0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 AP000347.1-202ENST00000435868 847 ntBASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 FAAHP1-202ENST00000446499 1238 ntBASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 AC009078.2-202ENST00000463353 338 ntBASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 LINC00167-201ENST00000530583 1419 ntBASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HCFC1R1Q9NWW0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 AC091304.2-201ENST00000564639 760 ntBASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 IGHV3-41-201ENST00000613121 348 ntBASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 AC068587.9-201ENST00000641814 219 ntBASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.4■□□□□ 0.7
HCFC1R1Q9NWW0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms