Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 CYP2D8P-201ENST00000433633 1490 ntBASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 AC007663.1-201ENST00000438948 1240 ntBASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 AC010947.1-201ENST00000623454 693 ntBASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 MYC-208ENST00000641036 567 ntBASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 KRT8P9-201ENST00000558927 1449 ntBASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN4Q9NRR5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 MIR564-202ENST00000385049 94 ntBASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN4Q9NRR5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 MIR4674-201ENST00000582457 87 ntBASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 MIR3180-5-201ENST00000583743 153 ntBASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN4Q9NRR5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.17■□□□□ 0.34
UBQLN4Q9NRR5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms