Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 DUX4L26-201ENST00000489078 1255 ntBASIC17.62■□□□□ 0.41
KLHL1Q9NR64 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL1Q9NR64 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.61■□□□□ 0.41
KLHL1Q9NR64 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL1Q9NR64 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 HMGA1P5-201ENST00000412453 271 ntBASIC17.6■□□□□ 0.41
KLHL1Q9NR64 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 SLC25A1P2-201ENST00000430693 912 ntBASIC17.6■□□□□ 0.41
KLHL1Q9NR64 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KLHL1Q9NR64 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 OR6D1P-202ENST00000641007 5290 ntBASIC17.59■□□□□ 0.41
KLHL1Q9NR64 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.59■□□□□ 0.41
KLHL1Q9NR64 KRT8P41-201ENST00000533985 1514 ntBASIC17.59■□□□□ 0.41
KLHL1Q9NR64 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms