Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HPS4Q9NQG7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.33■□□□□ 0.69
HPS4Q9NQG7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 AC011498.5-201ENST00000592027 486 ntBASIC19.33■□□□□ 0.68
HPS4Q9NQG7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.33■□□□□ 0.68
HPS4Q9NQG7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 TREX1-205ENST00000625293 1783 ntBASIC19.32■□□□□ 0.68
HPS4Q9NQG7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 AL157888.1-201ENST00000631930 593 ntBASIC19.32■□□□□ 0.68
HPS4Q9NQG7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 Z82202.1-201ENST00000623446 1880 ntBASIC19.32■□□□□ 0.68
HPS4Q9NQG7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 AC087289.5-201ENST00000586076 3175 ntBASIC19.32■□□□□ 0.68
HPS4Q9NQG7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HPS4Q9NQG7 AC016734.2-201ENST00000624325 1377 ntBASIC19.32■□□□□ 0.68
HPS4Q9NQG7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 TEX21P-204ENST00000641479 1693 ntBASIC19.31■□□□□ 0.68
HPS4Q9NQG7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 AC026396.1-201ENST00000419388 421 ntBASIC19.31■□□□□ 0.68
HPS4Q9NQG7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 AC112497.1-201ENST00000624824 639 ntBASIC19.31■□□□□ 0.68
HPS4Q9NQG7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HPS4Q9NQG7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms