Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 AC104771.1-201ENST00000603335 964 ntBASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SLC52A3Q9NQ40 HTR7P1-201ENST00000538670 1336 ntBASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 GNAS-203ENST00000306120 1878 ntBASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 AC091390.4-202ENST00000476426 537 ntBASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 MYLKP1-201ENST00000509077 1580 ntBASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC52A3Q9NQ40 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 REXO1L9P-201ENST00000604264 2108 ntBASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC52A3Q9NQ40 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 AP003097.1-201ENST00000530657 1135 ntBASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 AL023875.1-201ENST00000640777 796 ntBASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 RCC2P3-201ENST00000418112 1537 ntBASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC52A3Q9NQ40 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms