Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SND1-IT1Q9HBX3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AC104417.2-201ENST00000562989 1793 ntBASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 GPX1P1-201ENST00000388829 606 ntBASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 LSM12P1-201ENST00000411836 588 ntBASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AL390719.1-204ENST00000412397 1219 ntBASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AC007322.1-201ENST00000426983 750 ntBASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 BID-214ENST00000617586 542 ntTSL 5 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AC231657.2-201ENST00000624556 255 ntBASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SND1-IT1Q9HBX3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 AC008764.6-201ENST00000595909 2069 ntBASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 AC073592.3-201ENST00000625118 1834 ntBASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
SND1-IT1Q9HBX3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms