Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.02■□□□□ 0.63
LRRC40Q9H9A6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 AC097488.1-201ENST00000507834 756 ntBASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 TMEM191A-211ENST00000637163 1067 ntBASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 AC079598.2-202ENST00000546624 1451 ntBASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRC40Q9H9A6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 AC135050.7-201ENST00000624508 2218 ntBASIC19■□□□□ 0.63
LRRC40Q9H9A6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 MIR718-201ENST00000390190 70 ntBASIC19■□□□□ 0.63
LRRC40Q9H9A6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 MYC-208ENST00000641036 567 ntBASIC19■□□□□ 0.63
LRRC40Q9H9A6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19■□□□□ 0.63
LRRC40Q9H9A6 AL357033.4-201ENST00000617703 1807 ntBASIC19■□□□□ 0.63
LRRC40Q9H9A6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRRC40Q9H9A6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 AC008550.1-201ENST00000511500 884 ntBASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 AC073592.3-201ENST00000625118 1834 ntBASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LRRC40Q9H9A6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 HCG11-201ENST00000411553 5696 ntBASIC18.98■□□□□ 0.63
LRRC40Q9H9A6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms