Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CHMP4BQ9H444 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.6■■□□□ 1.37
CHMP4BQ9H444 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 AL023284.2-201ENST00000405850 579 ntBASIC23.6■■□□□ 1.37
CHMP4BQ9H444 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 TSPY17P-201ENST00000450329 467 ntBASIC23.6■■□□□ 1.37
CHMP4BQ9H444 AC008622.2-201ENST00000617006 1229 ntBASIC23.6■■□□□ 1.37
CHMP4BQ9H444 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHMP4BQ9H444 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 AP000593.1-201ENST00000393668 712 ntBASIC23.59■■□□□ 1.37
CHMP4BQ9H444 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHMP4BQ9H444 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 MIR564-202ENST00000385049 94 ntBASIC23.58■■□□□ 1.37
CHMP4BQ9H444 TSPY7P-201ENST00000431358 1114 ntBASIC23.58■■□□□ 1.37
CHMP4BQ9H444 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 FITM1-202ENST00000559294 800 ntBASIC23.58■■□□□ 1.37
CHMP4BQ9H444 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHMP4BQ9H444 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.58■■□□□ 1.36
CHMP4BQ9H444 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHMP4BQ9H444 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHMP4BQ9H444 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.58■■□□□ 1.36
CHMP4BQ9H444 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 AC005082.1-201ENST00000413042 2259 ntBASIC23.57■■□□□ 1.36
CHMP4BQ9H444 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 CCR12P-201ENST00000446203 998 ntBASIC23.57■■□□□ 1.36
CHMP4BQ9H444 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 AC008556.1-201ENST00000610908 2040 ntBASIC23.57■■□□□ 1.36
CHMP4BQ9H444 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.57■■□□□ 1.36
CHMP4BQ9H444 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CHMP4BQ9H444 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms