Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 SPDYE13P-201ENST00000445314 798 ntBASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3LQ9H3M9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 AC087289.5-201ENST00000586076 3175 ntBASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 AC112497.1-201ENST00000624824 639 ntBASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATXN3LQ9H3M9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 AL645929.1-201ENST00000420084 975 ntBASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 RCC2P3-201ENST00000418112 1537 ntBASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATXN3LQ9H3M9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 SEC1P-202ENST00000473944 940 ntBASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 KRT126P-201ENST00000549467 1181 ntBASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 AL512353.2-201ENST00000448759 1962 ntBASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATXN3LQ9H3M9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms