Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL023803.3-201ENST00000615559 522 ntBASIC17.35■□□□□ 0.37
UBQLN3Q9H347 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 WIZP1-201ENST00000531444 2299 ntBASIC17.35■□□□□ 0.37
UBQLN3Q9H347 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.35■□□□□ 0.37
UBQLN3Q9H347 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 INGX-201ENST00000359239 846 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 TSPY21P-201ENST00000433481 731 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 CCR12P-201ENST00000446203 998 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 AC128688.1-201ENST00000487626 519 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 AC092338.2-201ENST00000568827 1415 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 FAM87A-204ENST00000613235 858 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 AC116562.4-202ENST00000641738 218 ntBASIC17.34■□□□□ 0.37
UBQLN3Q9H347 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.34■□□□□ 0.37
UBQLN3Q9H347 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.33■□□□□ 0.37
UBQLN3Q9H347 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 TSPY23P-201ENST00000440136 739 ntBASIC17.33■□□□□ 0.36
UBQLN3Q9H347 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 ECEL1P2-202ENST00000465689 757 ntBASIC17.33■□□□□ 0.36
UBQLN3Q9H347 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 AL512353.2-201ENST00000448759 1962 ntBASIC17.33■□□□□ 0.36
UBQLN3Q9H347 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBQLN3Q9H347 AC007613.1-201ENST00000572811 2597 ntBASIC17.33■□□□□ 0.36
UBQLN3Q9H347 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 AC073508.3-201ENST00000619697 1419 ntBASIC17.32■□□□□ 0.36
UBQLN3Q9H347 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 TERF1P1-201ENST00000311003 1181 ntBASIC17.32■□□□□ 0.36
UBQLN3Q9H347 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 KRT18P21-201ENST00000515767 1272 ntBASIC17.32■□□□□ 0.36
UBQLN3Q9H347 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
UBQLN3Q9H347 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms